Results for "extraction"
Blogs
List of motif discovery tools !
...eins Search 3D protein fragments similar in structure to known active, binding and posttranslational modification sites. PEDANT -- Protein Extraction, Description and ANalysis Too...2046 days ago
List of comparative genomics resources !
...OrthoMaM -- orthologous mammalian markers A database of orthologous genomic markers for placental mammal phylogenetics. PEDANT -- Protein Extraction, Description and ANalysis Too...730 days ago
Bookmarks
Entrez Direct: E-utilities on the UNIX Command Line
...p queries. Record retrieval and formatting normally complete the process. EDirect also provides an argument-driven function that simplifies the extraction of data from document summari...2808 days ago
- ...uilt-in wizard for batch post-processing of downloaded files (archive extraction, file conversion, etc.) capa...I) databases. It can post-process downloaded files, including archive extraction and file conversions. http:/...
2678 days ago
- +7 more Bookmarks
Top-level pages
- Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an increasingly important tool to transform this data into information....
3999 days ago
Wire posts
News
- ...quence tens of thousands of high-quality, high-coverage genomes per year. Illumina says the $1,000 includes typical instrument depreciation, DNA extraction, library preparation, and est...
3815 days ago
ResearchLabs posts
- Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of function from topology of complex real-world netw...
3954 days ago
Bio-Scripts
Blast result parser with Perl and Bioperl
...number\tlength\tdescription\tE value\tbit score\tframe\tquery_start\t"; print OUT "query_end\thit_start\thit_end\tpositives\tidentical\n"; # extraction of information for each resul...2967 days ago
- #GffRead: GFF/GTF utility providing format conversions, filtering, FASTA sequence extraction and more. https://github.com/gpertea/gffread (jitENV) jitendra@Bathymodiolus:~$ conda in...
1256 days ago
- +1 more Bio-Scripts
Groups
Perl(Practical Extraction and Reporting Language) is a family of high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally developed by Larry...4005 days ago
Awk is widely used these days for extraction and manipulation of large scale biological data in Unix/Linux.Most of the awk code is single liner. Useful Weblinks: http://www.grymoire.c...3972 days ago
Tags
Caretta – A multiple protein structure alignment and feature extraction suite
Caretta – a multiple protein structure alignment and feature extraction suite Caretta, a multiple structure alignment suite meant for homologous but sequentially divergent protein families which consistently returns accurate alignments with a higher coverage than current state-of-the-...Tags: Caretta, multiple, protein, structure, alignment, feature, extraction, suite
1287 days ago
Comments
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...rge and we are using version 0.16 Once downloaded, and back at the Linux command line: R CMD INSTALL poRe_0.16.tar.gz The fastq extraction scripts for poRe are in githu...2227 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Implementing Hidden Markov Models(HMM) for Information Extraction in Perl http://www.lwebzem.com/cgi-bin/res/HMM.html3870 days ago
