2230 days ago
BBTools for bioinformatician !
...an still do non-kmer-based operations such as quality trimming at the same time.BBDuk2 can do all 4 kmer operations at once and is designed for integration into automated pipelines wher...2303 days ago
List of comparative genomics resources !
..., including high-quality images, video clips, and Web resources The TIGR Gene Indices -- clustering and assembling EST and known genes and integration with eukaryotic genomes Sear...710 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...s, Computational approaches to analysis of large scale Mass spectrometry data, Exploration and visualization of proteomic data, Data models and integration for proteomics and genomics,...3531 days ago
1136 days ago
3860 days ago
3593 days ago
Awesome perl frameworks, libraries and software - PART 2
...out the Perl Dancer micro framework pedros/WWW-Wordnik-API - Wordnik API perl implementation PagerDuty/pagerduty-nagios-pl - Nagios Integration for PagerDuty via Perl Wrappe...2527 days ago
Awesome perl frameworks, libraries and software - PART 4
...iker/znapzend - zfs backup with remote capabilities and mbuffer integration. cardinal/cardinal - Ca...atabase mindreframer/nginx-lua-stuff - some libs for NginX-Lua integration crowbar/barclamp-nagios ...2527 days ago
List of bioinformatics open source projects/software.
...http://www.biouno.org/ BioUno is a project that applies Continuous Integration tools and techniques in Bioin...are Galaxy http://galaxyproject.org/ Scientific workflow and data integration system GenePattern http://w...3789 days ago
List of In-silico Binding Site Prediction Tools
...(PDB) by combining protein sequence, chemical structure and 3D data in a single search. Currently it is the only tool that offers this kind of integration at this speed. PDBeMotif can...3776 days ago
BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular databases (STRING, DrugBank, KEGG, PharmGKB, BioGRID, GO, HPRD, and MSigDB)...3872 days ago
Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...gene expression. Mutations in the genome result in diverse transcriptional aberrations that can be missed in a stand-alone WES/WGS analysis. An integration of DNA variant analysis and R...3403 days ago
3981 days ago
National Training on Bioinformatics Computational Tools for Microbial Research Nov 19 to 30, 2013
Agricultural research in modern scientific arena is being represented by proper integration among various research fields of biological, chemical and physical sciences, because this fie...3905 days ago
3980 days ago
3917 days ago
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...for regulatory approval, t out-of-date recommendations made by bodies of experts, and day-to-day clinical experience of the practitioner. The integration and interpretation of this co...3903 days ago
3853 days ago
TULIP - The Uncorrected Long read Integration Pipeline
TULIP currently consists of two Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are likely to follow. Tulipseed takes as input alignments files of long reads to sparse short seeds, and outputs a graph...Tags: TULIP, Uncorrected, Long, read, Integration, Pipeline
2214 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
ZENBU is a data integration, data analysis, and visualization system enhanced for RNAseq, ChipSeq, CAGE and other types of next-generation-sequence-tag (NGS) based data. ZENBU allows for novel data exploration through "on-demand" data processing and interactive linked-visualizations and is a...Tags: ZENBU, collaborative, omics, data, integration, interactive, visualization, system
1980 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate variant calls a...1592 days ago
2207 days ago