Results for "Tool"
Users
Skills: SAM tool632 days ago
- About me: I am new to Bioinformatics, and currently doing research at BHU. I am keen to learn new bioinformatics tools and techniques, and make some good friends.
6 days ago
- +3 more Users
Blogs
Five points for bioinformatics software/tools
...ress the pros and cons of both kind of software/tools and try to assist (Hmmm not...bioinformatics. The best part about open source tools/software is that they’...are, which is entirely wrong. Using proprietary tools does not absolve you of the...3749 days ago
- ...ns for simultaneously comparing genomes of multiple amniote species. The tool removes the burden of manuall...they were on my machine:$ cd /SourceCache/jpeg-6b/src$ cp /usr/share/libtool/config/config.sub .$ cp /usr/...
3982 days ago
- +22 more Blogs
Bookmarks
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse t...genomics datasets. But we need to understand the background of software/tool to better explain the data co...
3987 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
...have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools used for bench-marking. We f...1188 days ago
- +280 more Bookmarks
Files
Bioinformatics approach to Boar Taint
...t file then used for calling SNPs and InDels inside previousy identified QTL regions on SSC5,13, and 7 with the aid of FreeBayes , a variant caller tool. A final list of SNPs was pre...3831 days ago
Statistics Using R with Biological Examples
...ry introductory course covers and to introduce the utilization of R as a tool for analyzing their data. My...ticians, and appreciate the great potential statistics has to offer as a tool to answer biological question...2572 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...AssemblyGeneStitch is a tool to assemble genes using netwo...t Assembly Genome Improvement ToolkitPAGIT (Post Assembly G...open-source, freely available tool that automatically downloads,...e EstimationConPADE is a tool used to estimate contig ploid...2727 days ago
Awesome perl frameworks, libraries and software - PART 2
...tbrain/irclogger - A Perl/PHP tool to log an IRC channel and mak...GTFS (transit) data perigrin/xml-toolkit - Framework for Marsh...pdf) kensanata/hex-mapping - Tools to work with hex maps for ro...bsp;- Perl application programming toolkit abh/colobus - Perl N...2536 days ago
- +2 more Pages
Top-level pages
- ...h, development, or application of computational tools and approaches for expanding...; and (3) the development and implementation of tools that enable efficient access...e the computer has become an essential research tool. Three key areas are the org...
3989 days ago
- ...from large databases. Data mining is becoming an increasingly important tool to transform this data into i...orations/issue4-2/zaki.pdf Bioinformatics and Medical Informatics: Tools for Mining and Applying Gene...
3988 days ago
- +38 more Top-level pages
Wire posts
News
BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular databases (STRING, DrugBank, KEGG, PharmGKB, BioGRID, GO, HPRD, and MSig...3881 days ago
Update Genome Workbench 2.7.15 released
...lts. Genome Workbench is built on the NCBI C++ ToolKit and uses cross-platform AP...in-house at NCBI and makes use of the NCBI C++ ToolKit. The C++ ToolKit provides..., instead of plain GI numbers Mac OS: improved tooltips for toolbar buttons Phyl...3762 days ago
- +16 more News
Opportunity posts
"Advances in Molecular Dynamics of Biomolecules" December 3-4, 2013 @ JNU
...has led to a remarkable progress in the large scale simulations at the molecular level. Molecular Dynamics (MD) simulations have been an invaluable tool in elucidating the structural...3919 days ago
Research Assistant @ NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
...31st March 2015 or earlier & Coterminus with the project Responsibilities: To help the PI for Beta testing and development of the SanGenix Tool for NGS data. Essential Qu...3848 days ago
- +8 more Opportunity posts
ResearchLabs posts
- ...ms in bioinformatics and computational biology. Recent developed online tools: - Budapest Reference Con...cing data. - AmphoraVizu: Chart visualization for metagenomics analysis tools AMPHORA2 and AmphoraNet. -...
3288 days ago
Fun
Bioinformatician become producer/director !!!
.... Hamari Sequence aapke pass hai. BLAST To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Search Kare Bioinformatician No.1 Mera Naam Tool Developer Hum Apke Genome Me...3960 days ago
Video
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3950 days ago
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3938 days ago
- +4 more Video
Bio-Scripts
- ...(never|error|always). Default is error --legacy-report use legacy style 'Written spots' for tool ./fastq-dump : 2.9.1 ( 2....
2168 days ago
Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick...869/869), done. Checking connectivity... done. ➜ Tools git:(master) ✗ cd Porechop...IN_SPLIT_READ_SIZE] [-h] [--version] Porechop: a tool for finding adapters in Oxfor...2148 days ago
- +4 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...biological problem and by using bioinformatics tools this can be easily achieved....ike this package is, it provides lots of useful tools for comprehensive analysis a...nformatics company will be developing effective tools to eliminate manipulated dat...2404 days ago
Groups
...ich affect us in some way. This group can be used to enlist all the companies or commercial actvities which involve bioinformatics as one of their tool to discover new treatment or...2351 days ago
Comments
Comment on "Short-read assembly using Spades !"
...ersburg genome assembler) is a popular software tool for short-read assembly. Here...bases. This step can be performed using various tools such as Trimmomatic or FastQ...of the assembled genome. This can be done using tools such as QUAST or BUSCO. Thes...457 days ago
- ...There are several tools available for short read sim...icial Read Simulator) is a popular tool for generating synthetic read...SOLiD, and 454. It is a versatile tool that allows users to simulate...es, and coverage levels. The wgsim tool is also open-source and avail...
457 days ago
- +47 more Comments
