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Genetic Algorithms demonstration with word DNA in Perl
...) { # set the fitness to 0 for unfit individuals (so they won't procreate) $individual->{survived} =...hift @_; my $pop_size = scalar @$population; # population size # create the weights array: select onl...2400 days ago
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## uses pod documentation in usage code use Getopt::Long qw(:config auto_version auto_he...2336 days ago
Plot custom gene density with R
library(karyoploteR) pp2277 days ago
Perl script to find coding regions in DNA sequences
...wer than 2 # return a message showing the error if (scalar(@ARGV) < 2) { print "dnaloglkh.pl codontable DNAsequence\n"; exit(1); } # create two vars contaning the filena...2183 days ago
Install Python locally on shared Linux server !
#Install python to local directory #Firstly, I create a folder in my home directory, download the python source and extract it mkdir ~/python cd ~/python wget https://www....2126 days ago
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