Results for "Open Source Codes"
Bio-Scripts
Perl script to run in parellel !
#!/usr/bin/perl use strict; use warnings; use Parallel::ForkManager; use Bio::SeqIO;...hed run with parameters $chr_set!\n"; } sub touch { my ($fn, $seq) = @_; open...1714 days ago
Install Samtools, Bcftools and htslib on Ubuntu !
#Inspired from online search sudo apt-get update sudo apt-get install gcc sudo apt-get install make sudo apt-ge...t PATH="$PATH:/usr/bin/samtools-1.9" export PATH="$PATH:/usr/bin/htslib-1.9" sourc...1586 days ago
Bash commandline to install Anaconda !
#The line begins with $ are the commands $ mkdir tmp $ cd t...1-he6710b0_1 ... installing: openssl-1.1.1b-h7b6447c_1 ... ins...h7725739_2 ... installing: pycodestyle-2.5.0-py37_0 ... instal...k-3.4-py37_1 ... installing: openpy...to take effect, close and re-open your current shell....1583 days ago
Bash command to install Miniconda !
(base) [wsu29@bladeamd-2 tmp]$ wget https://repo.anaconda.com/miniconda/Mini...0_0 - ncurses==6.1=he6710b0_1 - openssl==1.1.1d=h7b6447c_3 -..._0 - pycparser==2.19=py37_0 - pyopenss...For changes to take effect, close and re-open...1583 days ago
Installing ggplot2 and its dependencies on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter/minidot/bin$ sudo R...oaded 3.1 MB * installing *source* package ‘glue’ ... ** packa...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glue.c -o glue.o gc...curity -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stri_container_utf16....curity -Wdate-time -D_FORTIFY_SOURC...1577 days ago
- let width = $(window).width() - 20, hei...ecember"}, ]; let layout_data2 = [ { source: { id: 'january', start: 1, e...target: { id: 'april', start: 18, end: 20 }}, { sourc...
1552 days ago
Install conda on remote server !
Please take a look at the Anaconda repo archive page https://repo.continuum.io/archive/ and select an appropriat...cho 'export PATH="~/anaconda/bin:$PATH"' >> ~/.bashrc # Refresh basically sourc...1548 days ago
Installing docker for Bioinformatics on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo a...inux/ubuntu bionic stable" > /etc/apt/sources.list.d/docker.list + sudo -...splay a live stream of container(s) resource usage statistics stop...ontainers stop, then print their exit codes Run 'docker COMMAND --help...1541 days ago
Commands to install conda in Ubuntu !
...naconda Distribution contains open source software packages from third...relate to cryptogr aphy: openssl The OpenSSL Project is...rade, full-featured, and Open Source toolkit implementing the Tran...h7725739_2 ... installing: pycodestyle-2.5.0-py37_0 ... installi...1539 days ago
- The procedure to find os name and version on Linux: #Open the terminal application (bash shell) #For remote server login using the ssh: ssh user@server-name #Type any one of t...
1535 days ago
