Tags: KAST, Alignment, K-tuple, Compare, Genome, Sequences
865 days ago
Tags: MUM&Co, simple, bash, script, Whole, Genome, Alignment, information, MUMmer, detect, variants
802 days ago
Tags: Human, Complete, Genome, T2T
732 days ago
Environmental Genomics Group SciLifeLab/KTH Stockholm
Useful Metagenomics resourcesTags: metagenome, Genome, Resource, Pipeline
584 days ago
ALE: Assembly Likelihood Estimator
Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly. Depending on your genome size you may want to convert the .wig files to the BigWig format.Tags: ALE, Genome, Assembly, Likelihood, Estimator
487 days ago
Tags: ATCC, Genome, Portal
53 days ago
Tags: Genome, Context, Viewer, GCV, Visualization
412 days ago
Tags: Assembly, Genome, Record, pages, redirect, NCBI, Datasets
361 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]. Here's a step-by-step guide: Install RepeatMasker: First, you need to install RepeatMasker on your system. You can download it from the RepeatMasker website[...Tags: Steps, Repeats, Genome, Perl, RepeatMasker
311 days ago