List of motif discovery tools !
...of proteins with structural and topographical mapping of functionally annotated residues Identify and measu...rotein annotation resources through the Distributed Annotation System Annotate protein using this integrated...2035 days ago
3052 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline...2972 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...r than alternative pipelines Annotates genomic data with allele and...AM files(tumor & normal), annotated as germline or somatic; also...hese somatic mutations can be annotated with predicted transcript an...me Trust Sanger; functionally annotates variants from whole-exome se...2951 days ago
Tools for bacterial whole genome annotation
...e loads of genomes or need to annotate a pangenome or metagenome. No...ation Pipeline is designed to annotate bacterial and archaeal genome...ES using SSEARCH computation. Annotate Sequence in KEGG Mapper and P...to produce submission-ready, annotated draft genomes. MyPro install...2374 days ago
2117 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...be good about the environmental control. In other words, one should always easily control input output directories, modify files or directories, annotate and modify employed scripts d...2404 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...in the genome sequences: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl. Gene annotation: Annotate the genes in each genome usin...465 days ago
Comment on "Running Trinity on RNA-seq !"
...ral DE analysis methods, including edgeR, DESeq2, Limma/Voom, and ROTS. Extract coding regions using TransDecoder and functionally annotate the transcripts using Tr...2165 days ago