Comment on "CrossMap: program for genome coordinates conversion between different assemblies"
https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies845 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...T/linux-amd64/dataformat' % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed100 11.4M 100 11.4M 0 0 509k 0 0:00:23 0:00:23 --:--:--...895 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
....360) BMC Plant Biology (3.813 :: 4.714) Epigenetics (4.780 :: 5.081) Frontiers in Genetics G3-Genes Genomes Genetics (3.198 :: 3.508) Gene (2.138 :: 2.185)...1119 days ago
Comment on "Sibelia: A comparative genomics tool"
...ation results. Minimum block size ------------------ Default value = 5000. To change this value, set...ges: | K | D | | :------- | --------: | | 30 | 150 | | 100 | 1000...1300 days ago
Comment on "Setting up autoConTAMPR !"
...1 newly installed, 0 to remove and 50 not upgraded.Need to get 9994...12 newly installed, 0 to remove and 50 not upgraded.Need to get 365...2 newly installed, 0 to remove and 50 not upgraded.Need to get 205..... okt/46_eol_si.t ............ okt/50_utf8.t .............. okt/51_...1457 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
....360) BMC Plant Biology (3.813 :: 4.714) Epigenetics (4.780 :: 5.081) Frontiers in Genetics G3-Genes Genomes Genetics (3.198 :: 3.508) Gene (2.138 :: 2.185)...1857 days ago
Comment on "Estimate Genome Size"
...ers (see jellyfish documentation for options) gzip -dc reads1.fastq.gz reads2.fastq.gz | jellyfish count -m 31 -o fastq.counts -C -s 10000000000 -U 500 -t 30 /dev/fd/0 # generate...1912 days ago
Comment on "List of Bioinformatics and Computational Biology Journals"
Application in plant sciences accept tools and software https://bsapubs.onlinelibrary.wiley.com/journal/216804501959 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Application in plant sciences accept tools and software https://bsapubs.onlinelibrary.wiley.com/journal/216804501959 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
It is recommended to used genomes (N50 > 1Mb) for synteny analysis https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2026-42029 days ago