Results for "Apps"
Blogs
Protocol for De novo Genome Assembly using Illumina Reads
...p filler - http://www.baseclear.com/landingpages/basetools-a-wide-range-of-bioinformatics-solutions/gapfiller/ IMAGE (V2) - http://sourceforge.net/apps/mediawiki/image2/index.php?ti...1207 days ago
Finding a mimicry game for teaching on-line and mentioned general resources
...bs.umn.edu/populus/overview Drift & Gene Flow https://cartwrig.ht/apps/genie/ (Cock van Oosterhout...a great ppt to lead students through this) See also https://cartwrig.ht/apps/redlynx/ https://demonstrati...679 days ago
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Bookmarks
Latest paper on comparison of mapping tools
...p/ mrsFAST http://mrsfast.sourceforge.net/Home http://sourceforge.net/projects/mrsfast/files/mrsfast-ultra-3.1.0/ BFAST http://sourceforge.net/apps/mediawiki/bfast/index.php?tit...3899 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2907 days ago
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Pages
Awesome perl frameworks, libraries and software - PART 2
...beppu/pod-server - a web server for locally installed perl documentation -- think gem_server for perl awwaiid/continuity - Stateful Web Apps in Perl apparentlymart/libne...2497 days ago
Top-level pages
Most Commonly used Awk by Bioinformatician
...You can replace a pipeline of 'stuff | grep | sed | cut...' with a single call to awk. For a simple script, most of the timelag is in loading these apps into memory, and it's much fa...3915 days ago
- ...based tool) : http://www.bioconductor.org/packages/release/bioc/html/miRNApath.html miRWalk DB : http://www.umm.uni-heidelberg.de/apps/zmf/mirwalk/ TargetScanHuman...
3498 days ago
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Wire posts
News
Linux operating system aimed at scientists
...al applications and several hundred command line tools. And this is just skimming the surface of what the OS can do. Users have access to even more apps from the official repositorie...3396 days ago
- ...n of R and JavaScript available today. OpenCPU uses standard R packaging to develop, ship and deploy web applications. Several open source example apps are available from Github. I...
3229 days ago
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Bio-Scripts
- #!/bin/bash cd `pwd` perl ~/apps/SSPACE-1.2_linux-x86_64/SSPACE_v1-2.pl \ -l libraries.txt \ -s Contigs_over200_nocp.fasta \ -k 5 \ -a 0.7 \ -x 1 \ -m 30 \ -o 20 \ -b Rayk31_scaffolds_extension
1725 days ago
Tags
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Complement", "Jump to", "Copy and Paste sequences", fast and end scrolling, "Chromatogram adjustments", and "Searching for segments...Tags: Bioinformatics, Computational Biology, Apps
3544 days ago
Comments
Comment on "R and Bioconductor Tutorial"
A Compendium of Clean Graphs in R http://shinyapps.org/apps/RGraphCompendium/index.php2868 days ago
Comment on "Apps for Busy Bioinformatics Researchers !!!"
Check out this apps for biologist working in labs http://www.biocompare.com/Editorial-Articles/168745-Ten-Mobile-Apps-for-Biology-Laboratories/3473 days ago
