Results for "Core"
Users
About me: I am a trained bioinformatician from UK. My core area of interest are computation cancer genomics and bioinformatics software development.3964 days ago
- Skills: MetaCore
1814 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...will be like as follows: bioperl - Perl tools for computational molecular biologybioperl-run - BioPerl wrappers: scriptslibbio-perl-perl - BioPerl core perl moduleslibbio-perl-run-p...3961 days ago
Five unique traits of effective computational biologist
...erstand the results and explain it biologically. 2. Not a merely coder!!! I often encountered with biological programmer who call themself a hard-core computer programmer and avoid...3961 days ago
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Bookmarks
Public Databases for Bioinformatics !
...r: dhara: Synology 3614 Storage Appliance 4 Core Xeon 108TB disk storage 10G...ers: nandi: Kundaje and Phi Server 24 intel cores 256GB RAM 500GB of SSD sto...durga: Montgomery and sensitive data 24 intel cores 256GB RAM 500GB of SSD RAI...1150 days ago
shovill: Assemble bacterial isolate genomes from Illumina paired-end reads
Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other...1230 days ago
- +37 more Bookmarks
Files
Prepare for Coding Interview !
...ls structured from traditional big tech interview formats.While it does not include the latest developments in programming since 2019, it nails the core fundamentals in a very compre...856 days ago
Pages
Check Linux server configuration !!
...-a[root@localhost ~]# lsb_release -aLSB Version: :core-3.1-ia32:core-3.1-noarch:graphics-3.1-ia32:...nbsp; : 0siblings : 2core id &nb...3663 days ago
Genome Assembly Tools and Software - PART2 !!
...without error probability information (quality scores) and supports paired-end rea...s. Taking advantage of both shared-memory multi-core CPUs and distributed-memory c...ing portion of lucy makes use of phred quality scores, such as those produced by m...2697 days ago
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Top-level pages
Bioinformatics Companies in India
...9, Email: director@abcgenomics.comwww.abcgenomics.com 30. en-GENE-ier's Core Technology Services,1/340, Vi...raja Agrasen Public School)lucknow-226010, U.P., India.http://www.bio.egicore.com/ Best of luck fo...3936 days ago
List of In-silico Binding Site Prediction Tools
...solvent accessible surface area, energy-based scores, and sequence conservation,...dicted sites, and the similar sites with the Z-score ≥ 2.5 were selected. These...just below the protein surface and those in the core of the protein. In order to d...3755 days ago
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Wire posts
News
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
...s also available. This course is organized with support from the IAP “Belgian Medical Genomics Initiative”, SymBioSys and the Genomics Core. For inquiries, please email...3930 days ago
Update Genome Workbench 2.7.15 released
NCBI Genome Workbench is an integrated application for viewing and analyzing sequence data. With Genome Workbench, you can view data in publically available sequence d...3732 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...olymorphisms including structural variants, of the comparison of multiple and diverse genomes of a same species and of the construction of pan- and core-genomes. These challenging ta...3960 days ago
- ...ed/withdrawn by the funding agency. The vacancies are for a Department of Biotechnology, Government of India funded project entitled "Computational Core for Plant Metabolomics" (Proj...
3827 days ago
- +13 more Opportunity posts
Video
A Brief Introduction to Genetics
...ideas of genetics, the film moves on to describe the current techniques used to study genetics. Finally, the film explores the connection of these core concepts to genomics and bioi...3914 days ago
DNA is packaged in a chromosome experiment
...isting of a segment of DNA wound in sequence around four histone protein cores.[1] This structure is often...lly inherited information in the form of covalent modifications of their core histones. Nucleosomes were ob...3888 days ago
Bio-Scripts
Python script to download covid genome !
...g/ has more (1200?), but they require you to sign up import requests import yaml seqs = yaml.load(requests.get("https://www.ncbi.nlm.nih.gov/core/assets/genbank/files/ncov-seq...1147 days ago
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org #Parse comman...1112 days ago
- +11 more Bio-Scripts
Tags
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows a bank queuing model. Imagine the line being the data and bank-tellers the parallel workers. MCE enhances that model by adding the ability to chunk the next n elements from the in...Tags: Bioinformatics, Programming, Perl, MCE, Parallel, Core, Thread, Fork
2662 days ago
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Comments
Comment on "Nextflow: Data-driven computational pipelines"
A collection of high quality Nextflow pipelines https://github.com/nf-core/1547 days ago
Comment on "Various scholarships around the world !!"
...o-year grant meant to enable researchers working in frontier areas of science and engineering to establish themselves and move on to the mainstream core research grant (CRG). Criteri...1562 days ago
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