Results for "Correction"
Blogs
Bioinformatics tools developed for Oxford Nanopore data analysis !
...l time analysis toolshttp://minotour.nottingham.ac.uk/ nanoCORRError-correction tool for nanopore sequence da...sequence datahttps://github.com/mitenjain/nanopore NanocorrectError-correction tool for nanopore sequence da...2312 days ago
CANU genome assembly parameters !
...tely of if we want to smash them together, we can alternate the error correction process. canu -p test_asmbl...rectedReads.fasta.gz : file containing the input sequences after correction, trim and split based on cons...1937 days ago
- +1 more Blogs
Bookmarks
- ...or raw sequence quality analysis and control with few of process for reporting reads quality statistical details, trimming, filtering, and error correction. Please bookmarks them for th...
3226 days ago
- ...onfig generates a configuration file that notably specifies the average insert size of the mate-pair library preprocess allows the detection and correction of chimerae, the estimation o...
2845 days ago
- +41 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...e system. AutoEditor 1.20 – Automated Correction of Genome Sequence ErrorsAuto...sequencing. It also provides tools for error correction, sequence-to-read alignment a...quencing reads. Quake adopts the k-mer error correction framework, first introduced b...2677 days ago
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...842, 2010. Publisher Website Data quality assessment, filtering, and correction SolexaQA: At-a-glance qualit...l [requires a reference sequence] Quake: quality-aware detection and correction of sequencing errors. Kelley...3771 days ago
Commercial and public next-gen-seq (NGS) software
...h Genome Sciences Centre. Perl/Linux. SOAPdenovo - Part of the SOAP suite. See above. VCAKE - De novo assembly of short reads with robust error correction. An improvement on early vers...3511 days ago
- +4 more Top-level pages
Wire posts
News
- ...Gopinathan, IISER, Thiruvananthapurum] 7. Hybrid or hyper-GGA methods; beyond static DFT; Beyond LDA and GGA; Self-interaction correction; Dispersion corrected functio...
3821 days ago
Bio-Scripts
Tadpole is 250x faster than SPADes assembler !
...pole.sh in= out= mode=extend Correction: tadpole.sh in= out= mode=correct Extension and correction may be done simultaneously....r error- correction or extension. reads=-1...a window, halt correction in that direction. qualsum=8...968 days ago
Comments
Comment on "Short-read assembly using Spades !"
...genome browser. SPAdes also provides several options for tuning the assembly parameters, such as adjusting the k-mer length or enabling error correction. The SPAdes manual provides d...412 days ago
Comment on "Sibelia: A comparative genomics tool"
..." will contain their coordinates, where N is the number of stage. Zero corresponds to blocks obtained without any simplification. Boundaries correction --------------------- Algor...1277 days ago
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