Results for "Detecting"
Blogs
Tools to detect synteny blocks regions among multiple genomes
...ize annotated regions in addition to synteny regions. MicroSyn (http://www.lgm.upmc.fr/CHROnicle/SynChro.html) MicroSyn software as a means of detecting microsynteny in adjacent geno...2605 days ago
Calling narrow and broad peaks from ChIP-Seq data
Know about the state-of-the-art algorithms implemented in Strand NGS for detecting the binding sites of transcription factor (narrow peaks) and enriched regions of histone modification...3192 days ago
- +6 more Blogs
Bookmarks
Next Generation Sequencing (NGS) Tutorials
...ncing http://hmg.oxfordjournals.org/content/19/R2/R227.full.pdf ============================================== NGS data analysis pipelines Detecting and annotating genetic variat...3482 days ago
- ...ng a Cuffdiff analysis. Variant Detection Basic Galaxy Tutorial Variant Detection tutorial In this tutorial we cover the concepts of detecting small variants (SNVs and inde...
3647 days ago
- +21 more Bookmarks
Pages
Bio++ : C Language libraries for your biological need
...ogeny problem. Syst Biol. 2007 Aug;56(4):633-42.Dutheil J, Galtier N. Detecting groups of coevolving position...theil J, Pupko T, Jean-Marie A, Galtier N. A model-based approach for detecting coevolving positions in a mol...3942 days ago
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...6, 2010. PubMedCentral [Geoseq is a web service that allows searching deep sequencing datasets with a reference sequence of a gene of interest] Detecting and annotating genetic variat...3774 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...im to reconstruct different isoforms and alternate splicing from RNA-Seq data http://cbil.upenn.edu/beers/BOTTLENECK Bottleneck is a program for detecting recent effective population s...3731 days ago
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Wire posts
News
- ...so reported by Radford Neal). Similarly, tcrossprod(x,y) and %*% work in more cases with vector arguments. Utility function dynGet() useful for detecting cycles, aka infinite recursio...
3300 days ago
Video
- ...enome Project. The basic principle of the mapping scheme was to develop, by recombinant DNA techniques, random single-copy DNA probes capable of detecting DNA sequence polymorphisms wh...
3867 days ago
Bio-Scripts
- ...ification is GNU 5.4.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -...
2093 days ago
Pack a perl program with their dependencies on Ubuntu !
...ndeldetectionlocalassembly github.com - SvABA is a method for detecting structural variants in sequen...Heng Li.... Rahul Nayak@rahul GeneMates: an R package for Detecting Horizontal Gene Co-transfer b...1506 days ago
- +1 more Bio-Scripts
Tags
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the similarity of programs. To date, the main application of Moss has been in detecting plagiarism in programming classes. Since its development in 1994, Moss has been very effective in this role. The algorithm beh...Tags: MOSS, System, Detecting, Software, Similarity, detect, plagiarism, programming
2333 days ago
SVfinder: Tool for detecting genomic rearrangement form DNA-seq data
SVfinder provides genome-wide detection of structural variants from next generation paired-end sequencing reads.Tags: SVfinder, Tool, detecting, genomic, rearrangement, DNA-seq
2328 days ago
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Comments
Comment on "List of gene ontology software and tools"
Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.2968 days ago
