BOL: Results for "GenBank"

Results for "GenBank"

- Jit@jit.aber
List of genome announcement, notes and reporting journals
...nt a new chromosome sequence, its GenBank accession number and little e...table record of the corresponding GenBank submission. Must include abst...ences as they become submitted to GenBank. May also contain specificall...table record of the corresponding GenBank submission. Link: https://li...
2002 days ago
- Jit@jit.aber
Explore taxdump files !
...ollowing fields: tax_id -- node id in GenBank taxonomy database parent tax_id -- parent node id in GenBank taxonomy database rank...omy database division id division cde -- GenBank division code (three characte...
1542 days ago
+2 more Blogs

- Jit@jit.aber
OrganellarGenomeDRAW
...ated to convert genetic information stored in GenBank entries to graphical maps. The input text file has to be in GenBank flat file format, whereas the...chondriome). Nevertheless, you can upload any GenBank entry. The workflow is devide...
2813 days ago
- Shruti Paniwala@shruti
Artemis Comparison Tool (ACT)
...genomes and to explore conservation of synteny, in the context of the entire sequences and their annotation. It can read complete EMBL, GENBANK and GFF entries or sequences...
2791 days ago
+10 more Bookmarks

- Jitendra Narayan@admin
Bio++ : C Language libraries for your biological need
...RAA (Remote Acnuc Access), allowing you to fetch public databases like GenBank, EMBL or SwissProt,Algorithms...nts.Various I/O formats supported: Fasta, Mase, CLustal, Phylip, DCSE, GenBank (sequence only).Sequence mani...
3942 days ago

- Jitendra Narayan@admin
Bioinformatics Definitions
...lysis, and structural bioinformatics. Organizing biological knowledge in databases: Biological raw data are stored in public databanks (such as Genbank or EMBL for primary DNA seque...
3941 days ago
- Jitendra Narayan@admin
Genomics for Bioinformatician
...to the scientific community. Sequin Sequin is a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence datab...
3936 days ago
+1 more Top-level pages

- Rahul Nayak@rahul
GenBank to FASTA format conversion, Written By Junguk HUR http://tinyurl.com/ntp7w5v #Perl #FASTA #Genbank
3862 days ago
- Jit@jit.aber
#Genome #submission to #GenBank https://www.ncbi.nlm.nih.gov/genbank/genomesubmit/
2533 days ago
+2 more Wire posts

- Gudiya Pal@gudiya
Genome Workbench 2.10.7
...accommodate nodes of different sizes Table Import Dialog (MacOS): fixed issue with table visibility Fixed bug where different molecules IDs in GenBank could resolve to the same seq...
2859 days ago
- Bulbul@bulbul
Download assemblies from NCBI
...elow) to refine the set of genome assemblies of interest. Then, just open the “Download assemblies” menu, choose the source database (GenBank or RefSeq), choose...
2541 days ago
+2 more News

- Jitendra Narayan@admin
Bioinformatician become producer/director !!!
...Mera Naam Tool Developer Hum Apke Genome Mein Rehte Hein Do Sequence Baarah Hit Tera Ligand Chal Gaya Har Din Jo Modeling Karega Genbank Ke Us Paar Proteomics Koi Kh...
3913 days ago

- Surabhi Chaudhary@surabhi
Python script to download covid genome !
...to sign up import requests import yaml seqs = yaml.load(requests.get("https://www.ncbi.nlm.nih.gov/core/assets/genbank/files/ncov-sequences.yaml").text) seqs = seqs['genbank-sequences'] print("got %d se...
1130 days ago
- Anjana@anjana
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG us...'-format' => 'Fasta'); $out = Bio::SeqIO->newFh('-format' => 'Genbank'); print $out $_ while ;...
2910 days ago
+6 more Bio-Scripts

- BioStar@biostar
Comment on "Basic command-line to run BLAST"
...aved as a file for local searches. Choose the database: BLAST searches can be performed against many different databases, including the NCBI GenBank, RefSeq, and non-redundant da...
417 days ago
- Jit@jit.aber
Comment on "Complete genome sequence of Wuhan seafood market pneumonia virus is out !"
CBI teams at GenBank®, the Sequence Read Archive (SRA), NCBI Virus, and BLAST continue to rapidly process and release data associated with this outbreak as it becomes avai...
1546 days ago
+2 more Comments