Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous genes located on the same chromosome. These block regions have...2626 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is design...3726 days ago
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Should you get sequenced? Not all bad genes predict disease
“What we really don’t know yet is whether the predictive aspects of the genome are going to turn out to be beneficial or potentially harmful” “As we...3918 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can its...3964 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby projec...3963 days ago
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Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073956 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summar...3956 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laboratories of the Paris-Saclay Scientific Cluster, is seeking a bioinformatician to analyz...3965 days ago
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The Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @ http://www.imb.uq.edu.au/tim-bailey3964 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya....3935 days ago
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How Genes are Regulated: Transcription Factors
Each cell in our body inherits the same master copy of DNA, but different cell types use it differently. Transcription Factors help influence which genes are used in which c...3911 days ago
DNA is packaged in a chromosome experiment
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html A nucleosome is the b...3893 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import requ...1152 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GENBANK, $genbank) || die "cannot open $gb_report for reading: $!"; # Flag for multiline translation;...2933 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Center. His research interest rev...2378 days ago
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Comment on "Tools for Differential expression analysis"
Differential expression analysis is a widely used technique in genomics and transcriptomics research that allows researchers to identify genes that are d...437 days ago
Comment on "Basic command-line to run BLAST"
BLAST compares a query sequence to a database of known sequences and identifies the most similar matches. This is useful for identifying the function of a newly discovered g...437 days ago