Results for "Higher Studies"
Bio-Scripts
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 canu Collecting package metadata (current_repodata.json): done Solvin...1048 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 gap2seq Collecting package metadata (current_repodata.json): done Sol...
1048 days ago
- # get total number of bases covered at MIN_COVERAGE_DEPTH or higher samtools mpileup mapping_result_sorted.bam | awk -v X="${MIN_COVERAGE_DEPTH}" '$4>=X' | wc -l 32876 # get lengt...
2204 days ago
Installing Busco version 4.0.6
(base) jit@jit-HP-Pro-3335-MT: conda install -c bioconda -c conda-forge busco=4.0.6 Collecting package metadata (r...ge::libssh2-1.9.0-hab1572f_1 The following packages will be SUPERSEDED by a higher-...1447 days ago
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloa...ative field that involves the design, analysis, and interpretation of data for studies in public health and medicine...1505 days ago
- $ conda install -c bioconda kraken Collecting package metadata (repodata.json): done Solving environment: done...x-64::perl-threaded-5.26.0-0 The following packages will be SUPERSEDED by a higher-...
1456 days ago
Conda command to install checkV
(mENV) [jnarayan@hn1 Monkey_Pox]$ conda install -c conda-forge -c bioconda checkv Collecting package metadata (cur...0_1013 --> 1.2.12-h166bdaf_2 The following packages will be SUPERSEDED by a higher-...629 days ago
Install trimmomatic using Conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving enviro...1048 days ago
- conda install -c bioconda kat Collecting package metadata (current_repodata.json): done Solving environment: fai...n::libxslt-1.1.34-hc22bd24_0 The following packages will be SUPERSEDED by a higher-...
1040 days ago
Tadpole is 250x faster than SPADes assembler !
lege@jit-Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/Vir$ tadpole.sh Written by Brian Bushnell Last modified...rob for the prefilter. prepasses=1 Use this many prefiltering passes; higher...970 days ago
