Results for "Ka"
Users
Contact email: diwakar.1985@gmail.om3555 days ago
- Location: Kolkata
3807 days ago
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Blogs
Five unique traits of effective computational biologist
...ood biological programmer learned it a year before because it looked interesting; and the great biological programmer also read about the BioPerl packages, genomics, DNA string, gen...3946 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...nd annoying process. Some of the packages like GD is the real pain....Install the perl module:Now your package is ready to install.# make...ommand: Loaded plugins: refresh-packagekitupdates-newkey ...the following message: Reading package lists... DoneBuilding depen...3945 days ago
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Bookmarks
- Citrus Perl is a binary distribution of Perl created for GUI application developers. The distribution includes wxPerl, the Perl wrapper for wxWidgets. Where supported by the operating system wxWidgets is available as a package for the 2.8.x stable branch and the 2.9.x development branch.
3912 days ago
- Cava Packager allows packaging of applications written in Perl. Packaged applications can be distributed without the need for an installation of Perl on the target machine. Cava Packager is currently distributed u...
3912 days ago
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Files
Bioinformatics approach to Boar Taint
...recognized as a complex genetic trait called boar taint.Androstenone and Skatole in the fat primarily...for validation and then used for constructing SNPs haplotypes in close linkage disequilibrium with QTLs an...3785 days ago
R Graphical Cookbook by Winston Chang
...This means that there is sometimes considerable overlap of code between several figures In some cases, it may be necessary to install an add-on package from CRAN to get the code t...2150 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
...atics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a lot of power...3947 days ago
What are the difference between BioRuby and BioGem?
I came across two diferent but matching term BioRuby and BioGem. What are the difference between these two term? If both are using same Ruby language for development then why did they develope two different biological packages.3910 days ago
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Pages
Bio++ : C Language libraries for your biological need
...nonymous and non synonymous sites for coding sequencesVarious 'Neutrality' statistics on sequence data (Tajima, Fu and Li, Rand and Kann ...).Various measures of linkage disequilibrium.etc. Numeri...3943 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project...3943 days ago
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Top-level pages
- ...atics Glossary edited by Charles E. Kahn, Jr., Medical College of Wi...analysis by induction (e.g. A.J. Lotka, Elements of Physical Biology...es of microorganisms and a few of eukaryotes are available [4]. By a...earching with the FASTA3 program package. Methods Mol. Biol. 132:185...
3943 days ago
- ...g a script to analyse and explore the hidden information. This tutorial is aimed to introduce you new biological programming languages with their packages/libraries, and assist in y...
3943 days ago
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Wire posts
News
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative sum...3935 days ago
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
...m the IAP “Belgian Medical Genomics Initiative”, SymBioSys and the Genomics Core. For inquiries, please email Ms Narcisse Opdekamp ( narcisse.opdekamp@uzleuven.be ). More at >...3914 days ago
- +49 more News
Opportunity posts
Postdoctoral position in bioinformatics @ Sweden
...lly via Chalmers webpage. Application deadline: September 8, 2013. For questions, please contact: Ass prof. Erik Kristiansson, Matematiska Vetenskaper, erik.kristiansson@chalmer...3943 days ago
- ...A walk-in-interview will be held on 15.7.2013 at 12 noon in the Department of Biophysics, Molecular Biology and Bioinformatics, 92 A.P.C Road, Kolkata-700 009 to select one train...
3944 days ago
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ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...ystems using computational biology and bioinformatics techniques. We seek to accurately predict links, such as specific molecular interactions, in eukaryotic cell signaling systems...3943 days ago
- Population genomics Research Area: obesity; type 2 diabetes; systematic autoimmune disease; rheumatoid arthritis; tuberculosis; psoriasis; meningicoccal disease; Kawasaki disease Link @ http://www.imb.uq.edu.au/lachlan-coin
3943 days ago
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Fun
Bioinformatician become producer/director !!!
...; Raju ban gaya Genefinder. Har Ligand jo dock karega. Alignment to hona hi tha. Mera sequence mera base. Markov aapke hai kaun. Algo Banya Apne. MOTIF m...Hit Tera Ligand Chal Gaya Har Din Jo Modeling Karega Genbank Ke Us Paar...3914 days ago
Video
University of life sciences UMB - Campus Ås, Norway
Universitetet for miljø- og biovitenskap på Ås3913 days ago
Bioinformatics -- Understanding of living systems through information science
...The genome comparison system developed by the Sakakibara Lab calculates homologo...aring them with those of other organisms. The Sakakibara Lab uses a next-generat...field, many areas are still unknown. Professor Sakakibara, having been involved s...3912 days ago
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Bio-Scripts
Calculate ATGC percentage in parallel with perl
...es ) { my $pid = $pm->start($names[$child]) and next NAMES; checkATCG($names[$child]); $pm-...it_all_children; print "Everybody is out of the pool!\n"; sub checkATCG { my $name=shift; my $DN...2651 days ago
Calculate some statistics for a DNA alignment with Perl
...= map { $_->display_id } $alnobj->each_seq; my $results = $stats->calc_KaKs_pair($alnobj, $seq1id, $seq...4f \n",$_ , $results->[0]{$_}); } my $results2 = $stats->calc_all_KaKs_pairs($alnobj); for my $...2645 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at t...al method to design inhibitors for prokaryotic two-component systems....icting the interaction between the prokaryotic two-component proteins....utput(s) of the employed pipelines/packages/tools.2357 days ago
Groups
...software and data analysis. R's popularity has increased substantially in recent years with the availability of huge genomic data and biological packages. Bioconductor provides too...3946 days ago
...s also influenced by Eiffel and Lisp. Ruby was first designed and developed in the mid-1990s by Yukihiro "Matz" Matsumoto in Japan. BioRuby is a package of Open Source Ruby code, w...3915 days ago
Tags
- gKaKs is a codon-based genome-level Ka/Ks computation pipeline developed and based on programs from four widely used packages: BLAT, BLASTALL (including bl2seq, formatdb and fastacmd), PAML (including codeml and yn00) and KaKs_Calculator (including 10 substitution rate estimation methods). gKaKs ...
Tags: Bioinformatics, Analysis, NGS, Ka, Ks and Ka/Ks, calculations, Genome
2801 days ago
Comments
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...it should install things into your conda-directory. When you install packages via cpan it will also print the folder perl is installing the package into. If you want to be ex...411 days ago
Comment on "Tools for Differential expression analysis"
...sion analysis, including: DESeq2: This R package is widely used for analyzin...ifferential expression. edgeR: Another R package that is commonly used for d...rential expression. NOISeq: This is an R package that is used for differenti...416 days ago
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