3013 days ago
funannotate: Eukaryotic Genome Annotation Pipeline
...mpetus for this software package was to be able to accurately and easily annotate a genome for submission to NCBI GenBank. Existing tools (such as Maker) require significant manually...2058 days ago
Awesome perl frameworks, libraries and software - PART 4
...OS applications book/Act - A Conference Toolkit (Git conversion of the Subversion repository) turingou/docor - a smart and tiny README maker using default manifest packag...2497 days ago
Tools for bacterial whole genome annotation
...was mainly created to analyze parasite genomes of up to about 300 Mb. MAKER: A portable and easily configurable genome annotation pipeline. MAKER allows smaller eukaryotic and...2335 days ago
Roche has acquired Bina Technologies !!!
...were not disclosed. For Roche, the move is yet another in a string of acquisitions. Last week (December 18), Roche paid $489 million for antibody maker Dutalys. And earlier this mon...3417 days ago
Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, MAKER, Genome, Annotation, Pipeline, NGS, Assembly
3013 days ago
Genome Annotation using MAKER tutorial !
MAKER is a great tool for annotating a reference genome using empirical and ab initiogene predictions. GMOD, the umbrella organization that includes MAKER, has some nice tutorials online for running MAKER. However, these were quite simplified examples and it took a bit of effort to...Tags: Genome, Annotation, MAKER
1966 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...om a public database, such as NCBI or Ensembl. Gene annotation: Annotate the genes in each genome using gene prediction software or tools such as MAKER. Identify orthologous genes:...426 days ago
2917 days ago