DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We hav...g technology, the models proposed in DAVI are generic and can be used across different NGS t...1157 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/ You can also ad....nlm.nih.gov/pubmed/23657089 GATK: a Toolkit for Genome Analysi...http://www.broadinstitute.org/gatk/ Metagenomics:http://www.nbi...3498 days ago
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Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis requires a diversity of tools...igned pipelines to build complex, reproducible workflows for NGS...Zanetti G, Fotia G. (2014) Orione, a web-based framework for NGS a...3585 days ago
Next generation sequencing(NGS) books
Employing different technologies, the purpose of NGS platform is to decode the identity or modification on the nucleotides. NGS platforms evolve quickly and capture the main stream. This bookmark is created to provide NGS online books links.3639 days ago
Bioinformatics algorithms tutorials
Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and H...ardware Concepts for BioinformaticsFinding us in Homolog.us (Search Algorithms)NGS G...3614 days ago
Integrative Genomics Viewer (IGV) tutorial
The Integrative Genomics Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS a...3596 days ago
COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS"...3585 days ago
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