Results for "Order"
Users
About me: ... https://pubmed.ncbi.nlm.nih.gov/?term=Narayan+Jitendra Github @ https://github.com/jnarayan81 PhD thesis @ British Library https://ethos.bl.uk/OrderDetails.do;jsessionid=E6D7E929...23 days ago
- About me: Biomedical researcher, entrepreneur. Envision openscience and cross border collaboration that push scientific progress
3070 days ago
Blogs
Five unique traits of effective computational biologist
...iological programmers who rise to the top ranks of their profession are not only good programmer but also expert in biological stuff. Moreover, In order to be a good and effective bi...3963 days ago
Five points for bioinformatics software/tools
...y QA forum. I personally believe this coding horror brings the biggest downside of open-source programs; where you need some programming skills in order to implement the program in y...3721 days ago
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Bookmarks
A simple tutorial for a complex ComplexHeatmap
...ze) require(digest) require(cluster) If all load successfully, proceed to Part 3. Otherwise, go through the following code chunks in order to ensure that each package i...1142 days ago
Scaffolding of a bacterial genome using MinION nanopore sequencing
...dies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical sequencers, so the genomic order of several generated contigs...3238 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...inant data mining approach was used to predict the location and orientation of alpha helices in membrane-spanning proteins. It is based on a first order Markov model (MM) with an arc...3958 days ago
Applied Statistics for Bioinformatics using R
The purpose of this book is to give an introduction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visualize data as...2088 days ago
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Pages
Bio++ : C Language libraries for your biological need
...eady to use the C++ libraries of biology. These library are designed in order to reduce the C++ long codes...mal, gamma, etc.).Function object implementation, with first and second order derivatives.Numerical derivat...3961 days ago
Check the Size of a directory & Free disk space.
...uo;du”command with some flag gives you a better output than the default one. The option '-h' stands for human readable format. Therefore, in order to print the sizes of the fil...3715 days ago
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Top-level pages
- ...NA sequence at an annotated protein sequences: establish the correct order of sequence contigs to obtain...all six frames; compare the DNA sequence to known protein sequences in order to verify exons etc with homo...
3960 days ago
- ...as adding effects to an image. For example, in order to sharpen a digital photo, t...ones to change and how much to change them in order to make the image look sharpe...thm is to sort data in ascending or descending order. But the number of goals is i...
3959 days ago
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Wire posts
News
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
...yze is much beyond the existing computing capabilities. This tsunami of data has led to a sea change in the storage and computing requirements. In order to gear up to tackle these ch...3858 days ago
Make Genomic Research Less Ethnically-Biased
...ican billionaire Carlos Slim Hélu, the world’s 2nd-richest man, is giving an additional $74 million to a genomics center in Boston in order to right a bias in the field&...3853 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...rs through the Galaxy platform. The bioinformatician will therefore also have to provide researchers with advices on their experimental designs in order to ensure compliance of produ...3962 days ago
Postdoctoral Associate - Bioinformatics at Duke University Medical Center
...s) and of validation approaches. In addition, experience in penalized regression methods, data base manipulation; and strong programming skills in order to conduct Monte Carlo studie...3934 days ago
- +16 more Opportunity posts
ResearchLabs posts
- Seamless integration of a series of biological processes finally manifests as what we perceive as "Life". In order to gain insights about life and its manifestations in different for...
3898 days ago
- ...lysis. Current computational interests: Systematic analysis of genetic epistasis to identify redundant or compensatory systems and to reveal order of action in genetic pathways...
3721 days ago
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Video
DNA is packaged in a chromosome experiment
...tely 2 m of linear DNA have to be packed into a nucleus of roughly 10 µm diameter). Nucleosomes are folded through a series of successively higher order structures to eventually form...3890 days ago
Showreel 2008 - Cortical Studios
...e 3D animation productions for even the most complex projects. We translate complex scientific information into comprehensible artistic imagery in order to improve communication in t...3871 days ago
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Bio-Scripts
- bio
2482 days ago
Bash commandline to install Anaconda !
...851b7497cc14d5ca060064394569f724b67d9b5f98a926ed49b834a6bb73a Anaconda3-2019.03-Linux-x86_64.sh $ bash Anaconda3-2019.03-Linux-x86_64.sh In order to continue the installation...1568 days ago
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Tags
Glia: a Graph/Smith-Waterman (partial order) aligner/realigner
glia's main use is as a local realigner. It will realign reads to a set of known (or putative) variants in a VCF, both consuming and producing an ordered stream of BAM alignments. More at https://github.com/ekg/glia glia -f ~/human_g1k_v37.fasta -t 20:62900077-62902077 -v variants.vc...Tags: Glia, Graph, Smith-Waterman, partial, order, aligner, realigner
1572 days ago
AGORA: Algorithm for Gene Order Reconstruction in Ancestors
AGORA stands for “Algorithm for Gene Order Reconstruction in Ancestors” and was developed by Matthieu Muffato in the DYOGEN Laboratory at the École normale supérieure in Paris in 2008. // | | // ) ) // ) ) // ) ) // | | //__| | // // / ...Tags: AGORA, Algorithm, Gene, Order, Reconstruction, Ancestors
810 days ago
Comments
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...mon ancestor, but have diverged due to speciation. Determine the synteny: Determine the synteny between the genomes by comparing the location and order of the orthologous genes. Syn...436 days ago
Comment on "Sibelia: A comparative genomics tool"
...and descriptions. IDs are just index numbers of sequences (in the same order as they apper in the input fi...n syntenic regions. If such regions contain variations close to their borders, they will be truncated. In...1298 days ago
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