Results for "Scripts"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...che search perl BioPerl Output will be like as follows: bioperl - Perl tools for computational molecular biologybioperl-run - BioPerl wrappers: scriptslibbio-perl-perl - BioPerl cor...3943 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatician involves mo...3944 days ago
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Bookmarks
- ...e years most bioinformatics people amass a collection of small utility scripts which make their lives easier...can contribute. Biocode is a curated repository of general-use utility scripts. Algorithms scripts @ https:...
3659 days ago
- Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts
3354 days ago
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Pages
Awesome perl frameworks, libraries and software - PART 2
...Excel binary files Geo-omics/scripts - General scripts used i...coding style. Farow/hexchat-scripts - Perl scripts for HexCh...ttf-scripts - Font::TTF::Scripts perl module sanko/net-bittor...module MadsAlbertsen/miscperlscripts - Small collection of ra...2488 days ago
Awesome perl frameworks, libraries and software - PART 3
...Media - Perl modules and scripts for handling the conversion a...russoz/perltests - Small scripts to test constructs - mostly f...argument processing for Perl scripts masterzen/redis-snmp -... - Short, simple, direct scripts for creating ASCII graphical...2488 days ago
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Top-level pages
- ...s.org/ http://genome.ucsc.edu/ http://www.ncbi.nlm.nih.gov/genome http://www.ebi.ac.uk/genomes/ http://flybase.org/ http://cmr.jcvi.org/tigr-scripts/CMR/CmrHomePage.cgi http://w...
3908 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...interested in exploring Markov Chain Exploration and understand it with graphical version please visit http://www.planet-source-code.com/vb/scripts/ShowCode.asp?txtCodeId=75049&...3818 days ago
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Wire posts
News
- ...ode, therefore supporting data analysts with a quick and low-risk migration to R. The manual translation of many, frequently rather complex SPSS scripts often presents itself as a te...
3447 days ago
- ...quo; button is now available in the Assembly database. This makes it easy to download data for multiple genomes without having to write scripts. For example, you can run a...
2541 days ago
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Opportunity posts
JRF/SRF / Project Assistant-II recruitment in National Agri-Food Biotechnology Institute (NABI)
...ence database . sequence analysis tools/packages, NGS Analysis . 3) Should have knowledge and skills to work in linux environment and write shell scripts. Age : 28 years Hiring...2541 days ago
Bioinformatician - Purdue Cancer Center
...fic analyses, advise faculty on the design of experiments, writing manuscripts for publication, and writing...molecular biology, biochemistry, and genetics Proficiency in writing scripts using Perl, Python, Java, or...1180 days ago
Bio-Scripts
- # Count k-mer occurrence using Jellyfish 2.2.6 jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? sread_1.fastq sread_2.fastq # points for a histogram jellyfish histo -o 19mer_out.histo 19mer_out #Plot results using R ##load the data into dataframe19 dataframe19
2258 days ago
Mapping with BWA-mem or BWA-sampe in one go with python script !
...BESST provides a script (https://github.com/ksahlin/BESST/blob/master/scripts/reads_to_ctg_map.py) for obta...ad alignment pipeline. https://github.com/ksahlin/BESST/blob/master/scripts/reads_to_ctg_map.py2117 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...Y? A researcher, in this field, should never create and use copy paste scripts but always must understand WH...directories, modify files or directories, annotate and modify employed scripts during the research and shoul...2355 days ago
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Comments
Comment on "List of Bioinformatics and Computational Biology Journals"
Publish scripts at The Journal of Open Source Software http://joss.theoj.org/about2069 days ago
- ...files or Chromosome size file (two-column, plain text file). Visualization can be performed by genome browsers like UCSC, IGB and IGV. However, R scripts can also be used to visualiza...
2131 days ago
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