Results for "Shell"
Bio-Scripts
...dynamically generate the download link directly from the dictionary download_link = lambda wildcards: sample_links[wildcards.sample] shell: """ curl -L {params...1508 days ago
Install Python locally on shared Linux server !
...e default, if we type python command, it will use the default python of #the system. We are going to update the environment variables to force the shell to use our new python. Edit #...2090 days ago
Bash commandline to install Anaconda !
...nf.d/conda.fish no change /data/sata_data/workshop/wsu29/anaconda3/shell/condabin/Conda.psm1 no change /data/sata_data/workshop/wsu29/anaconda3/shell/condabin/conda-hook.ps1 no c...1547 days ago
Bash command to install Miniconda !
...f.d/conda.fish no change /data/sata_data/workshop/wsu29/miniconda3/shell/condabin/Conda.psm1 no change /data/sata_data/workshop/wsu29/miniconda3/shell/condabin/conda-hook.ps1 no c...1547 days ago
Commands to install conda in Ubuntu !
.../profile.d/conda.sh no change /home/jit/anaconda3/etc/fish/conf.d/conda.fish no change /home/jit/anaconda3/shell/condabin/Conda.psm1 no change /home/jit/anaconda3/shell/condabin/conda-hook.ps1 no c...1503 days ago
- The procedure to find os name and version on Linux: #Open the terminal application (bash shell) #For remote server login using the ssh: ssh user@server-name #Type any one of the...
1499 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 --...
1434 days ago
- ...es a pipe to both STDIN and STDOUT. It can be used in both ways: $output = open2(my $out, my $in, 'command arg1 arg2'); OR without using the shell $output = open2(my $out, m...
1155 days ago
Rules to run fastp / Snakemake !
...json=RESULTS + "/fastq_trimmed/{sample}.json" threads: 5 log: RESULTS + "/logs/fastp/{sample}.preprocess.log" shell: "fastp --in1 {input...893 days ago
