Results for "Single-Cell Sequencing"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several pe...rs: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - Java API to...3950 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous genes located on the same chromosome. These block regions ha...2610 days ago
- +39 more Blogs
Bookmarks
Sequencing Solutions to World Health
"New technology that quickly, easily and economically reveals the genomes of viruses and pathogens transforms public health and medicine." Source: Life technologies3902 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We...strate that while existing tools are based on data generated from a specific sequencing technology, the models propos...1146 days ago
- +365 more Bookmarks
Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowled...3945 days ago
India's own first drug - from Biocon.
Psoriasis is immune-mediated disease that effects the skin. the Disease on an average affects about 10-20 million Indians and it attacks the immune system of human beings...3920 days ago
- +5 more Files
Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a lot of...3952 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3945 days ago
- +2 more Discussion topics
Pages
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming with imperative programming Ruby is a dynamic, reflectiv...
3947 days ago
- I found several useful bioinformatics articles which exaplain, define and elaborate the bioinformatics in scientific way. Therefore, instead of writting it again I d...
3921 days ago
- +7 more Pages
Top-level pages
- The completion of the first human genome drafts...was just a start of the modern DNA sequencing era which resulted in further...d strategies of high-throughput DNA sequencing, so called the “high-th...uo; (HT-NGS). The decreasing genome sequencing cost and desire to explore an...
3948 days ago
- "Bioinformatics is a science of biological pred...oinformatics component. The goal of sequencing projects, for example, is not...sequence data: The primary data of sequencing projects are DNA sequences. T...5–219The Genome International Sequencing Consortium (2001) Initial seq...
3947 days ago
- +54 more Top-level pages
Wire posts
News
- "Ludovic Orlando and Eske Willerslev , Centre for GeoGenetics have beaten sequencing of the ancient DNA recor...
3812 days ago
UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Science mee...ture state of all aspects and applications of Next Generation Sequencing. More at >> http:...3919 days ago
- +55 more News
Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laborat...Scientific Cluster, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data analysis. In the c...3949 days ago
- van Noort Group is looking for PhD fellows We currently a...derlies this project consists of high-throughput sequencing of DNA and mRNA of population...r this position. Experience with high throughput sequencing analysis methods, machine lea...
3949 days ago
- +146 more Opportunity posts
ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our long-term research objective is to understand microtubule organization in living cells...
3949 days ago
- The human genome project and similar projects in disease-causing organisms such as Plasm...hods for analysis of structural variation in cancer genomes Next Generation sequencing in malaria Computational com...
3948 days ago
- +43 more ResearchLabs posts
Video
- View more AMAZING medical animations at http://www.nucleuslibrary.com To download FREE medical animations of pregnancy and birth, visit http://www.prenateperl.com/yt2012...
3817 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air...graph theory and modern data structures, can be used to attack challenges in sequencing, medical genomics and biologi...3902 days ago
- +22 more Video
Bio-Scripts
- #!/usr/bin/env perl # Usage: fastaRead.pl data.fa use strict; use warnings; my $filename = $ARGV[0]; my $sequence; open my $fileH, "
2914 days ago
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-Wu...2906 days ago
- +23 more Bio-Scripts
Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand...losion in biological data has resulted from genome projects, next generation sequencing and other 'omics' techniques....3416 days ago
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?3197 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Center. His research interest...2362 days ago
Groups
Python is a programming language that lets you work more quickly and integrate your syst...Python and BioPython tutorial link @ https://sites.google.com/site/seqomics/sequencing/info-seq/python...3946 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pursue worldwide to comprehand the genomic comple...3907 days ago
- +4 more Groups
Tags
- -Nature Publishing Group selected single-cell sequencing as Method of the Year for 2013. ->100 peer-reviewed single-cell publications based on Fluidigm technology Source: http://online.wsj.com/article/PR-CO-20131231-904382.html About Single-Cell Sequencing: http://bernstein.harvard.ed...
Tags: Single-Cell Sequencing, DNA sequencing, single-cell mRNA sequencing, transcriptome analysis
3777 days ago
Comments
Comment on "Want to Know which genome assembler rule the world ?"
Canu Assembler is my personal favourate.Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequelor Oxford Nanopore MinION).1950 days ago
- AfterQC AfterQC - Automatic Filteri...n script htseq-qa takes a file with sequencing reads (either raw or aligned...quality analysis pipeline for deep sequencing data. NGS QC Toolkit NG...ality control tool designed for DNA sequencing data for raw data, alignment,...
2137 days ago
- +3 more Comments
