Results for "Tree"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...anipulation # sudo apt-get install bioperl If it is installed then flash the following message: Reading package lists... DoneBuilding dependency tree ...3944 days ago
- ...the dependencies. Then watch it work.To prevent creating conflicts with the software that Apple installs by default, Fink creates its own directory tree at /sw where it installs most...
3933 days ago
- +9 more Blogs
Bookmarks
Public Databases for Bioinformatics !
...goldenPath/hg38/bigZips/hg38.fa.gz. For use case 2 we used the set of narrowPeak files summarized in https://github.com/wkopp/janggu_usecases/tree/master/extra/urls.txt (a...1133 days ago
- ...s the rates for the possible transitions assumed by the model, infers the set of ancestral chromosome numbers, and estimates the location along the tree for which polyploidy events (...
3382 days ago
- +56 more Bookmarks
Files
Tree illustrating the lack of interchromosomal rearrangement of the microchromosomes.
Tree illustrating the lack of interchromosomal rearrangement of the microchromosomes. No interchromosomal microchromosome fusions from the avian ancestor unless otherw...1981 days ago
Pages
Bio++ : C Language libraries for your biological need
...public databases like GenBank, EMBL or SwissProt,Algorithms for plotting trees, with support for vector for...enetics and molecular evolution Data structure and IO Phylogenetic trees.IO from newick files, with s...3941 days ago
BioRuby :Ruby packages for biologist
...y-lang.org/project/bioruby/ BioRuby Project Discussion Grouphttp://portal.open-bio.org/mailman/listinfo/bioruby BioRuby related Projects: Project treehttp://rubyforge.org/softwarem...3941 days ago
- +4 more Pages
Top-level pages
- ...so applied to various other data, e.g. taxonomy trees, relationship data from meta...t, protein 3D structure alignment, phylogenetic tree construction, prediction and...ry aspects, by the construction of phylogenetic trees from the pairwise difference...
3941 days ago
- ...into predefined groups. For example, an email program might attempt to classify an email as legitimate or spam. Common algorithms include decision tree learning, nearest neighbor, n...
3940 days ago
- +17 more Top-level pages
Wire posts
News
- ...genes through the visualization of phylogenetic trees and multiple sequence alignm...h are based on the analysis of the phylogenetic trees. The automated pipeline used...ublic download section with the complete set of trees, alignments and orthology pr...
3912 days ago
Update Genome Workbench 2.7.15 released
...ce views, various alignment views, phylogenetic tree views, and tabular views of d...oved tooltips for toolbar buttons Phylogenetic Tree Builder Tool: improved diagno...d issues for showing labels of collapsed nodes Tree View: added an option to stop...3714 days ago
- +3 more News
Opportunity posts
Protein function annotation and machine learning - UPMC - Paris, France
...(HPC) environments. The idea is to uncover as much as possible the evolutionary processes of protein sequences that took place throughout the whole tree of life and that affected the...3558 days ago
2 positions on the evolutionary analysis of biological sequences in Montpellier - France
....ibc-montpellier.fr), concerns evolutionary analyses of large-scale genomic data -- including the inference of very large phylogenies, gene/species tree reconciliation, comparative g...3135 days ago
- +3 more Opportunity posts
ResearchLabs posts
- My main topics of interest are: The impact of non tree-like evolution such as horizontal gene transfers and hybridization on species biology Evolution and adaptation of animals i...
1256 days ago
Video
- ...netics. The evolutionary relationships of organisms are discovered through both morphological and molecular data. A specific type of phylogenetic tree, the cladogram, is also cover...
3902 days ago
Mathematics for Computing : Huffman Code (Tree Approach)
Determining a Huffman code for a discrete memoryless source, using the Huffman Tree algorithm3873 days ago
- +1 more Video
Bio-Scripts
Converting from Windows-style to UNIX-style line endings with dos2unix
...ad-320-15ISK:~/Downloads/abc/bin$ sudo apt install dos2unix [sudo] password for bioqueen: Reading package lists... Done Building dependency tree Reading state informa...1170 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...-320-15ISK:~/Downloads/$ sudo apt install ./atom-amd64.deb [sudo] password for bioqueen: Reading package lists... Done Building dependency tree Reading state informa...1169 days ago
- +25 more Bio-Scripts
Tags
iTOL: interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display and manipulation of phylogenetic trees. It provides most of the features available in other tree viewers, and offers a novel circular tree layout, which makes it easy to visualize mid-sized tree (up to several thousand leaves). Trees...Tags: Bioinformatics, Tree, Phylogeny, Visualization, iTOL
2645 days ago
- Lifemap is an interactive tool to explore the WHOLE NCBI TAXONOMY. The concept used in Lifemap is similar to the one used in cartography with tools like Google Maps© or Open Street Maps: exploring is done by zooming and panning. The current tree contains ALL species present in NCBI ...
Tags: Bioinformatics, Lifemap, Tree, Phylogeny, Taxonomy, Draw, View, Zoom, See, France, Interactive
2576 days ago
- +13 more Tags
Comments
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...(4.936 :: 4.900) RNA Biology (4.974 :: 5.237) Scientific Reports (5.578 :: 5.597) Scientific Data FEBS Journal (4.001 :: 4.068) Tree Genetics & Genomes (...1098 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...ctive algorithm using C++. https://phys.org/news/2020-06-scientists-synteny-blocks-animals.html https://github.com/ComparativeGenomicsToolkit/hal/tree/master/synteny1404 days ago
- +6 more Comments
