Results for "Unix"
Users
Skills: unix3525 days ago
Blogs
List of bioinformatics workflow management tools !
...agement to visualization tools. [ paper-2018 | web ] Nextflow (recommended) – A fluent DSL modelled around the UNIX pipe concept, that simplifies...1143 days ago
Install ImageMagick from Unix Source
ImageMagick builds on a variety of Unix and Unix-like operating systems including Linux,...is required and fortunately almost all modern Unix systems have one. Download&nb...o these questions, and more, in Advanced Unix Source Installation. jiten...2146 days ago
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Bookmarks
- ...input a BAM file of aligned reads and generates a list of likely variants in VCF format Pipelines are for those who are comfortable with using the UNIX command line; and often allow...
3653 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To determine which set of bi...3000 days ago
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Pages
Bio++ : C Language libraries for your biological need
...stems programmers who like the terse, concise manner in which powerful expressions can be coded. C was widely distributed with an Operating System (Unix) that was actually largely wr...3948 days ago
Virtual Bioinformatics Online Tutorial
...nline bioinformatics training centres. Here I provide some of them: Virtual Institute of BioinformaticsNational University of Ireland , Ireland UNIX, GCG, SEQLAB and STADEN Tutor...3921 days ago
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Top-level pages
Useful Links for Bioinformaticians
...w.gustavo.net/programming/cgi.shtml www.cgidir.com/Tutorials/ webdesign.about.com/cs/cgi/ http://www.cgi101.com/class/ Unix Tutorial www.ee.surrey.ac.uk/Teaching/Unix/ webreference.com/programmin...3131 days ago
Most Commonly used Awk by Bioinformatician
...re to read this stuff properly explained. roll Two thorough tutorials: http://www.gnu.org/software/gawk/manual/gawk.html http://www.grymoire.com/Unix/Awk.html A famous list of us...3913 days ago
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News
Update Genome Workbench 2.7.15 released
...uses cross-platform APIs for graphics. It runs on your local machine, and is available for Windows 2000/XP, Linux, MacOS X, and various flavors of Unix. NCBI Genome Workbench is an...3721 days ago
- ...ccordingly. Functions in the Summary group duplicate less. (PR#15798) (Unix-alikes.) system(cmd, input =...(, extra_cols = FALSE) allows a minimal set of columns to be computed on Unix-alikes: on some systems witho...
3306 days ago
Opportunity posts
Postdoctoral position in bioinformatics @ Sweden
...next generation DNA sequencing, is highly valued. The applicant should also be proficient in programming (e.g. Python/Java/C) and comfortable with Unix/Linux systems. Interaction wi...3948 days ago
- ...olecular modeling and simulation studies, QSAR, Virtual screening, pharmacophore modeling packages like SYBYL/ACCELRYS etc. Familiarity with Linux-/Unix-based computer systems would...
3841 days ago
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Bio-Scripts
Converting from Windows-style to UNIX-style line endings with dos2unix
...15ISK:~/Downloads/abc/bin$ sudo apt install dos2unix [sudo] password for bioqueen...ollowing NEW packages will be installed: dos2unix 0 upgraded, 1 newly installe...ive.ubuntu.com/ubuntu bionic/universe amd64 dos2unix amd64 7.3.4-3 [351 kB] Fetch...1177 days ago
Groups
...f high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally developed by Larry Wall in 1987 as a general-purpose Unix scripting language to make re...3953 days ago
...e days for extraction and manipulation of large scale biological data in Unix/Linux.Most of the awk code is single liner. Useful Weblinks: http://www.grymoire.com/Unix/Awk.html http://www.hcs.harv...3920 days ago
Tags
Is there any quick way to check the installed Perl modules from Linux/Unix command line.
We always need to keep track of all the Perl modules, and install new one if required. Generally, whenever we run the Perl script it flash error message with the name of module not installed. I would like to know the quicker way to check the installed modules on any system/server.Tags: Unix, Linux, Perl, Modules, Command Line
3947 days ago
Install ImageMagick from Unix Source
ImageMagick builds on a variety of Unix and Unix-like operating systems including Linux, Solaris, FreeBSD, Mac OS X, and others. A compiler is required and fortunately almost all modern Unix systems have one. Download ImageMagick.tar.gzfrom www.imagemagick.org or a mirrors&nbs...Tags: Install, ImageMagick, Unix, Source
2146 days ago
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Comments
Comment on "Installing BLAT on Linux !"
Get the code. The best way to do this now for Unix users is via Git following the instructions at: http://genome.ucsc.edu/admin/git.html Or, fetch the entire source in a single file...1211 days ago
Comment on "Setting up autoConTAMPR !"
...s-1.7044.tar.gzChecking if your kit is complete...Looks goodGenerating a Unix-style MakefileWriting Makefil...xt::CSV faster.Checking if your kit is complete...Looks goodGenerating a Unix-style MakefileWriting Makefil...1442 days ago
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