Five points for bioinformatics software/tools
...m your computational and analysis work, most of the reviewer also prefers the open source based results so that they can validate the results if validation required. 2. Code headache...3710 days ago
Important Journals, Blogs and Forums for Bioinformaticians
...on computational biology by Lior Pachter (fair warning: dialogue here can get a bit heated!). Blue Collar Bioinformatics: articles related tool validation and the open source bioinform...2645 days ago
2784 days ago
LIBSVM -- A Library for Support Vector Machines
...fferent SVM formulations Efficient multi-class classification Cross validation for model selection Probabil...olver. Automatic model selection which can generate contour of cross validation accuracy. https://www.cs...2470 days ago
Bioinformatics approach to Boar Taint
...uality, coverage of SNP allele, functional and structural annotation, and repeats, etc. Selected SNPs will be genotyped in sample population for validation and then used for constructin...3791 days ago
3949 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ity control tool for high-throughput sequence data. Home Page FASTX-toolkit: FASTQ/A short-reads pre-processing tools Home Page Reference-free validation of short read data. Schrö...3781 days ago
3548 days ago
Cleaner BLAST Databases for More Accurate Results
Do you use BLAST to identify a sequence or the evolutionary scope of a gene? That can be challenging if contaminated and misclassified sequences are in the BLAS...14 days ago
Postdoctoral Associate - Bioinformatics at Duke University Medical Center
...hD degree in statistics, biostatistics or bioinformatics, extensive experience in analyzing high-dimensional data (microarray, SNP, CNVs) and of validation approaches. In addition, expe...3923 days ago
SRF/JRF/RA @ UNIVERSITY OF HYDERABAD
...rch Fellowship in CSIR- sponsored research project. JRF/SRF/RA (one vacancy) CSIR sponsored “In silico design, identification and in vitro validation of lead molecule inhibitors t...3858 days ago
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Tags: Bioinformatics, Validation, Assembly, BUSCO, Orthologs, NGS
2919 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of genome assembly software in a rapidly changing field of next-generation sequencing. The main results of GAGE have now been publishe...Tags: Bioinformatics, Analysis, NGS, Validation, Assembly, Genome
2799 days ago
2933 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
... Yes Copula Models Yes Yes Experimental Cross-Validation Yes Ye...3554 days ago