Results for "Viterbi Algorithm"
Blogs
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an actual or theor...bc/ BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...2968 days ago
Tools and Method for Haplotype phasing !
Huge amounts of genotype data are being produced with rec.../~junliu/plem/ “Read-backed phasing” algorithm: http://www.broadinstitute.org/gsa/wiki/index.php/Read-backed_phasing_algorithm SHAPE-IT: http://www.gr...1332 days ago
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Bookmarks
Bioinformatics Algorithm Demonstrations and Tutorials
...of selected computer science algorithms important in bioinforma...platform for demonstration of algorithms, since various steps of the...gramming experience. The algorithms demonstrated include two app...g/downloads/bae/BioinformaticsAlgorithmsInExcel.zip One of the best...3698 days ago
RACA: Reference-Assisted Chromosome Assembly
Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative ge...2944 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha hel...used for automatic prediction of trans-membrane (TM) protein structure. While algorithm for identification of TM segm...3938 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never atte...ntly abstract and fluent to describe algorithms and interactions in a wide v...ases like GenBank, EMBL or SwissProt,Algorithms for plotting trees, with sup...elihood (NNI, including a PhyML-like algorithm).Mixed distance/ML tree recon...3941 days ago
Genome Assembly Tools and Software - PART2 !!
...s 0.7.7 – A Cycle-Basis Algorithm for Accurate Haplotype Assemb....2.1 – Network Matching Algorithm to Gene AssemblyGeneStitch&nb...e AssemblyIsoLasso is an algorithm to assemble transcripts and e...M (Short Reads ASseMbly) algorithm is designed for DNA assembly...2679 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions an...within bioinformatics: (1) the development of new algorithms and statistics with which to...protein function, and expression data clustering. Algorithmic development is an important...
3941 days ago
- Data mining, the extraction of hidden predic...ectations.This page Covering theory, algorithms, and methodologies, as well...email as legitimate or spam. Common algorithms include decision tree learni...sic machine learning and data mining algorithms. For detail visit: http...
3940 days ago
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Wire posts
News
- A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel, for finding insertions and deletions in next generation sequencing data sets. Scalpel, which is open source and a...
3540 days ago
Artificial intelligence is more accurate than doctors in diagnosing breast cancer
Artificial intelligence is more accurate than doctors in diagnosing breast cancer fro...d and trained a computer model on X-ray images from nearly 29,000 women. The algorithm outperformed six radiolo...1579 days ago
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Opportunity posts
- CSIR-INSTITUTE OF HIMALAYAN BIORESOURCE TECHNOLOGY (Council of Scientific and Indust...Qualifications: Ph.D. in Bioinformatics. Desirable: Working experience in algorithm development and sequence anal...
3938 days ago
PostDocs positions in computer science in HELSINKI, FINLAND
Several university departments in the Helsinki region, Fi...delling, including Machine learning, Data mining, Algorithms, Computational Logic, Cloud...day care services. Positions are offered in: Algorithm engineering (String Algorithm...3887 days ago
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ResearchLabs posts
Computational Structural Biology Lab IITKGP
The major areas of research: Molecular recognition: Pr...velopment of protein-protein, protein-RNA docking algorithm and prediction of binding sit...in proteins. Study of miRNAs and development of algorithms for miRNA and traget predict...3224 days ago
- Shirley is a computational biologist with expertise in cancer epigenetics. Her research focuses on algorithm development and integrative m...
1545 days ago
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like thi...Structure Dus Numbari GCG Karo Sajana Naukar NCBI Ka 1942 -- A KEGG Story Algorithm Se Program Tak Haan Maine Bh...3912 days ago
Video
Mathematics for Computing : Huffman Code (Tree Approach)
Determining a Huffman code for a discrete memoryless source, using the Huffman Tree algorithm3873 days ago
Bio-Scripts
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-W...2899 days ago
Genetic Algorithms demonstration with word DNA in Perl
#!/usr/bin/perl -w # GA demonstration with word DNA (512...ally written by Abigail # Documentation for the algorithm is at # http://theoryx5.uwin...=> 0, fitness => 0 }; } } __DATA__ about algorithm and biology by century c...2365 days ago
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Tags
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG island, where "p" simply indicates that "C" and "G"...Tags: Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration, Bioinformatics, Computational Biology, CpG island
3818 days ago
Comments
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with source-codes http://bioinformaticsonline.com/pages/view/6380/hidden-markov-models-viterbi-algorithm-markov-chain-exploration-with-script3818 days ago
