Results for "Whole genome resequencing"
Blogs
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to mak...type of analysis that you are doing. This is particularly true in the case of genome assem...3700 days ago
- In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions amongst them. In my research I use...ct designed to provide a visual means for simultaneously comparing genomes of m...
3933 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3938 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a day...g fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein s...ession, constructing evolutionary trees, analyzing genome rearr...
3938 days ago
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Files
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell or odour...as genetic markers in selection of male pigs with reduced boar taint levels. Resequencing of a total of 47 samples belo...3782 days ago
- Some fish kidnaped a bioinformatician for their genome analysis.
3846 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Ma...3945 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3938 days ago
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Pages
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, data...or the Ruby language. This project is supported by University of Tokyo (Human Genome Cente...3940 days ago
- I found several useful bioinformatics articles which exaplain, defi...iculum. By Russ Altman. Human Genome Research A description of the Human Genome Project. Retooling for Bioin...arch. Understanding the human genome By D. L. Brutlag, in&nbs...2001 Bioinformatics U., Genome Techn...
3914 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequenc...ration sequencing” (HT-NGS). The decreasing genome sequencing cost and desire to...ogically suitable language to handle ever growing genome or pr...
3941 days ago
- ...nsive electronic databases on genomes and protein sequences, and t...s on three types of datasets: genome sequences, macromolecular str...s DataBase for the C. elegans genome, FLYBASE for D. melanogaster...notation in the comparison of whole genomes. Several methods detec...
3940 days ago
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Wire posts
News
- "Ludovic Orlando and Eske Willerslev , Centre for GeoGenetics have beaten sequencing of t...y.htm http://geogenetics.ku.dk/latest-news/a-700.000-year-old-horse-gets-its-genome-seque...
3805 days ago
UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Scien...3912 days ago
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Opportunity posts
Livestock Functional Genomics Summer School (LFG 2013)
*Livestock Functional Genomics Summer School - Call for applications* 1st Livestock Functional Genomics Summ...stock big molecular data, and be able to manipulate high density genotypes, whole genome seque...3922 days ago
2013 NextGen Genomics & Bioinformatics Technologies (NGBT) Conference, New Delhi, INDIA
2013 NextGen Genomics & Bioinformatics Technologies (NGBT) Conference SciGenom R...In the ten years since the first human reference genome was completed for US$3 billio...great reduction in sequencing cost. Today a human genome can b...3916 days ago
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ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms such as Plasmodium falciparum, which ca...quence data in cancer Methods for analysis of structural variation in cancer genomes Nex...
3941 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development of high-throughput genomic technologies such as microarrays have revolutionis...
3941 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this....BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI...rmatician No.1 Mera Naam Tool Developer Hum Apke Genome Mein...3911 days ago
What a bioinformatician always dream for ???
Well established bioinformatics labs with SGI(silicon graphics interface) License of all commercial softwares. Complete, and fully assembled genome of th...3838 days ago
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Video
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all...e life. One is example is the genome. In all organisms, DNA contai...ation, and this is called the genome. But the amount of informatio...erved between species. If the genome is considered as a long text,...3910 days ago
Translational Bioinformatics: Transforming 300 Billion Points of Data
Translational Bioinformatics: Transforming 300 Billion Points of Data into Diagnostic...escription: There is an urgent need to translate genome-era discoveries into clinical...diabetes, and evaluating patients presenting with whole genomes sequ...3903 days ago
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Bio-Scripts
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import re...1129 days ago
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -query "...1094 days ago
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Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome proje...3409 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institut...g for (AKMARK (Project CODE:5153403)) is, applying a bioinformatics-supported genome, tran...2355 days ago
Groups
INTIMATE secrets hidden in your DNA could be stolen without you even realisin...ng a glass from which you have drunk, a "genome hacker" could obtain a comprehensive scan of your genome, revealing DNA variants that...or bioinformatician you hack the entire genome to un...3946 days ago
Our research interest falls in the broad field of bioinformatics and, more specifically...ng for motif finding Biclustering algorithms Genome Assembly Developement of n...mbly procedure Comparative genomics approaches in genome assem...3936 days ago
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Tags
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pursue worldwide to comprehand the genomic complexity of all the organism and also used to reveal genetic factors responsible for dif...Tags: Sequencing, NGS, Whole genome resequencing, denovo sequencing, exome sequencing, methylated sequencing, RNA sequencing, Bisulfite sequencing, targeted sequencing, Chip-Seq, dRAD and ddRAD sequencing, etc
3900 days ago
Comments
Comment on "Bioinformatics approach to Boar Taint"
ISMB/ECCB 2011 Application of whole genome resequencing to detect sequence polymorphisms underlying boar taint.../ismbeccb2011/posterlistd227.html?cat=U PAG 2013Application of Whole Genome Resequencing to Detect SNPs for Selection...3911 days ago
Comment on "Bioinformatics approach to Boar Taint"
Application of whole genome resequencing in the dissection of QTLs affecting boar taint EMBnet.journal 19.A https://www.google.com/url?sa=t&rct=j&q=&esrc=s&source...3911 days ago
