Results for "chromosome-level"
Blogs
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous genes located on the same chromosome. These block regions have...2633 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic material, DNA, to two daughters’ cells. During this process, duplicated deoxyribonucleic acid (DNA) goes t...3575 days ago
- +20 more Blogs
Bookmarks
PLOS Computational Biology: Translational Bioinformatics educational resources
PLOS present collection of Education articles: “Translational Bioinformatics”. This collection is presented as an online “book” which could ser...3937 days ago
- RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012) Nature Protocols In this tutorial we cover the concepts of RNA-Seq differential gen...
3676 days ago
- +72 more Bookmarks
Files
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell or odour which is recognized as a complex genetic trait called boar taint.Androstenone and Skatole...3812 days ago
Statistics Using R with Biological Examples
This book is a manifestation of my desire to teach researchers in biology a bit more about statistics than an ordinary introductory course covers and to introduce the utiliz...2553 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can its...3970 days ago
- In our day to day research activity, we need to securely copy our data from several to local computer and visa-versa. I am jotting down some of the commonly used SCP comma...
3724 days ago
- +6 more Pages
Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted in further invention, improved development toward new advanc...
3970 days ago
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, statistical and computing methods that aim to solve biologi...
3970 days ago
- +20 more Top-level pages
Wire posts
News
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes to chromosomes, which continues EMBL-EBI series of meetings focused on fundamental as...3948 days ago
Webinar: Wednesday 21 August 2013 at Noon EDT
This webinar will describe the use of combinatorial pooling to reconstruct gene sequences within BACs. Recent work in barley has shown that this level of sequence knowledge...3942 days ago
- +12 more News
Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laboratories of the Paris-Saclay Scientific Cluster, is seeking a bioinformatician to analyz...3971 days ago
Bioinformatics PhD studentship available in New Zealand
Bioinformatics PhD studentship available in New Zealand The importance of transcriptional control has been explored in a burgeoning line of research over several decades;...3970 days ago
- +70 more Opportunity posts
ResearchLabs posts
- Our research aims to better understand how living systems respond to chemical agents. A key aspect of our approach involves using computational frameworks that are powered b...
3970 days ago
- Interested in various topics at the intersection of ecology and evolution. In my research I use rotifers as model organisms for experimental studies at the individual and po...
1169 days ago
- +12 more ResearchLabs posts
Fun
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the biological world, but they won't give us the genetic code :P...3743 days ago
- 1. A futuristic computational biology student was told to write "It is in my gene!!!" on the board 100 times as a punishment. here's his response -use warnings;for ($count=1...
3724 days ago
Video
- View more AMAZING medical animations at http://www.nucleuslibrary.com To download FREE medical animations of pregnancy and birth, visit http://www.prenateperl.com/yt2012 T...
3840 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics. In this new field, comp...3939 days ago
- +5 more Video
Bio-Scripts
- #!/usr/bin/env perl use strict; use warnings; use LWP::Simple; use XML::XPath; use XML::XPath::XMLParser; # Use DAS of UCSC to fetch specific sequence by its given...
2933 days ago
Blast script to index and extract sequence !!
# look at the file $ head EC4115.fa >NC_011353.1 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome. AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAG...2875 days ago
- +21 more Bio-Scripts
Groups
Perl(Practical Extraction and Reporting Language) is a family of high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally developed by La...3975 days ago
Python is a programming language that lets you work more quickly and integrate your systems more effectively. Python is an easy to learn, powerful programming language. It h...3968 days ago
- +1 more Groups
Tags
- Chromosome-level genome assembler combining multiple de novo assemblies https://github.com/jkimlab/IMAP
Tags: Integrative, Meta-Assembly, Pipeline, IMAP, Chromosome-level, genome, assembler, multiple, de novo, assemblies
1732 days ago
- Syri compares alignments between two chromosome-level assemblies and identifies synteny and structural rearrangements.
Tags: Syri, compares, alignments, chromosome-level, assemblies, synteny, structural, rearrangements
727 days ago
Comments
Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly installed and the directory with "Sibelia.py" is in your "PATH" environment variable or in...1308 days ago
- This a list of available commands with their brief description. &n...
1543 days ago
- +5 more Comments
