Five points for bioinformatics software/tools
...convince) you to make decision on your software selections. The most common newbie questions are: Should...sponsible for troubleshooting your own errors most of the time. We commonly receive the HELP email to s...3722 days ago
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Best practices in bioinformatics training for life scientists
Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and resources but also...3932 days ago
Bioinformatics approach to Boar Taint
...c trait called boar taint.Androstenone and Skatole in the fat primarily cause boar taint. Metabolism of androstenone and sex steroids share a common pathway which makes removal o...3804 days ago
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Awesome perl frameworks, libraries and software - PART 2
...g for serious Perl schwern/Perl-Signatures-Common - A common definition and test suite for...perl6-File-Tools - File::Tools – common shell commands replacements...id/test--most - Test::Most -- The most commonly needed testing functionalit...2509 days ago
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Barber pole worm , sheep pathogen sequenced !!!
...s of grazing livestock. These parasites cost the global livestock industry billions of dollars per annum in lost production and drug costs. A common type of clover may be a preve...3911 days ago
Post-doc position at LABGeM - Evry, France
...formatics or computational biology - Previous experience in network or protein family analysis - Programming skills (C/C++, Python, Java) and in common biostatistical analyses - Te...3083 days ago
Summer school open to PhD students
...ol open to PhD students with different backgrounds and interests. Several sessions and workshops will be held within five focus groups, and one common theme: mountain research....838 days ago
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The Centre for Bioinformatics (MCB) Lab
The Centre for Bioinformatics (MCB) is a diverse collection of professors, postdoctoral fellows, and students, who share a common interest in Bioinformatics. Research Area We ar...3962 days ago
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Retrieve NCBI GenBank records with a range of accession numbers
...tothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Escape; use LWP::UserAgent; use HTTP::Request::Common; my %param = ( query...2930 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...gconf-service gconf-service-backend gconf2-common libgconf-2-4 The following N...tom gconf-service gconf-service-backend gconf2-common libgconf-2-4 0 upgraded, 5 n...Selecting previously unselected package gconf2-common. (Reading database ... 19427...1190 days ago
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FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the frequency of k-mers in sequencing data and predicts t...Tags: FastGT, alignment-free, method, calling, common, SNVs, directly, raw, sequencing, reads, alignment-free
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Comment on "A quick guide to Phred scaling"
...call. Quality score encoding: The Phred quality scores are typically encoded in the quality score field of the FASTQ file format, which is a common format used for storing seque...430 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...the orthologous genes between the genomes using tools such as OrthoFinder or OrthoMCL. Orthologous genes are genes that are homologous and have a common ancestor, but have diverged d...438 days ago