MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the similarity of programs. To date, the main application of Moss has been in detecting plagiarism in programming classes. Since its development in 1994, Moss has been very effective in this role. The algorithm beh...Tags: MOSS, System, Detecting, Software, Similarity, detect, plagiarism, programming
2356 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-celled eukaryotes, but a number of factors combine to make it far rarer in multicellular eukaryotes. In order for a eukaryotic spec...Tags: Tools, detect, horizontal, gene, transfer, HGT, genomes
867 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies genomic regions into five copy number states. We vali...Tags: EXCAVATOR, detect, copy, number, variants, whole-exome, sequencing, data
1965 days ago
Tags: CroCo, program, detect, potential, cross, contaminations, HTS, assembled, transcriptomes, expression, quantification
1961 days ago
Tags: ClipCrop, tool, detect, structural, variations, single-base, resolution, soft-clipping, information
1949 days ago
Tags: Majiq, Voila, detect, quantify, visualize, complex, de-novo, splicing, variations, RNASeq
1413 days ago
Tags: virus, detect, fast, identification
893 days ago
Tags: chromeister, fast, heuristic, approach, detect, conserved, signals, extremely, large, pairwise, genome, comparisons
839 days ago
Tags: MUM&Co, simple, bash, script, Whole, Genome, Alignment, information, MUMmer, detect, variants
756 days ago