Results for "gene expression regulation"
Users
Interests: gene expression regulation1533 days ago
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, an...ical programmer learn Perl's regular expression when they started a pro...explain their one graph (which they generally produce after one year of work...ed problems into search engines that generate n...3965 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same...is a collection of contiguous genes located on the same chromoso...ether it encompasses multiple genes, an area containing single g...define synteny as “Two genes which occur on the same chro...s conservation of large-scale gene order...2625 days ago
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Bookmarks
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3965 days ago
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3960 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just...e did not find any good and user friendly regular expression cheat sheet, hence write our own cheat sheet. The Regular Expression...3968 days ago
- Liver cancer is third leading cause of deaths and fourth most frequent o...l RNA molecules known to inhibit mRNA expression of particular gene by binding improperly to 3'UTR region of a gene and hence block binding of TF /tran...become hyper-methylated thats prevent expression...
3576 days ago
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Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3960 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programm...oncise manner in which powerful expressions can be coded. C was wi...ncluding sequence analysis,phylogenetics, molecular evolution and population genetics.Bio++ is designed in an extensi...n, inversion, etc.Random number generation...3963 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analys...extremely high descriptive power. Classes for Multiple alignment (Bio::Alignment), Gene Ontol...3962 days ago
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Top-level pages
- ...spatial organisation of their expression in the cell encoded by...al genomics experiments (e.g. expression data, yeast two–hybrid...3D structure alignment, phylogenetic tree construction, prediction an...ide polymorphisms to hunt for genetic sources of deseases. Many compl...
3962 days ago
- Data mining, the extraction of hidden predictive information fro...quo;s becoming more common to generate reams of data then ask so...ple working in bioinformatics generally come from computer scien...Tools for Mining and Applying Genetic Information in Patient Care:http...
3961 days ago
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Wire posts
News
Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073955 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with...to draw informative summary plots for analyses such as differential expression or clustering, where for each gene list...3955 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 la...r, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data a...etween sequence variation, functional variation, gene/protein expression...3964 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowled...of this young computational systems biology group is to generate b...oli, will be exploited to better understand two complex genetic tr...
3964 days ago
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ResearchLabs posts
The Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @ http://www.imb.uq.edu.au/tim-bailey3963 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development o...l backgrounds. Research Area: Linear models for microarray data Digital gene expression...
3963 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, nam...Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST k...le jayenge Raju ban gaya Genefinder. Har Ligand jo dock ka...BLAST To Hona Hi Tha !! Meri Gene Tumha...an Maine Bhi ClustalW Kiya Hai GeneScan K...3934 days ago
- 1. A futuristic computational biology student was told to write "It is in my gene!!!" on the board 100 times as a pu...00; $count++) { print "It is in my gene!!!";}I guess, he is gonna to...bsp; $startGene=$1;&n...r asked the bartender:CREATE TABLE gene IF NO...
3716 days ago
Video
How Genes are Regulated: Transcription Factors
...es use it differently. Transcription Factors help influence which genes are used in which cell. Unde...us to better understand and model their binding to DNA and their regulation of gene expression. Scientific Direction by the...3910 days ago
DNA is packaged in a chromosome experiment
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here...ates an added layer of regulatory control, which ensures correct gene expression. Nucleosomes are thought to carry epigeneticall...3892 days ago
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Bio-Scripts
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.or...en(seqs)) from Bio import Entrez allseq = {} for x in seqs: if 'gene-region' in x and x['gene-regio...1151 days ago
Read lines from input file – print lines that match a regular expression
#!/usr/bin/perl use strict; use warnings; my $line; #read the line-by-line for each line ask if it matches the regex print it if it matches while($line = ){...2932 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compat...ftware. I basically want to do de-novo assembly, map reads, align reads, and expression...3546 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBIT...ng kit based on this profile. Alterations in the gene, tran...en you will be retired, what would you tell next generation...2377 days ago
Groups
Our research interest falls in the broad field of bioinformatics and, more specifically into Computational...CGH (Comparative Genomic Hybridization) microarrays Computational genetics Candidate gene prior...3958 days ago
This group is being designed to cover some of the common algorithms underlying the following fundame...sembling genomes, comparing DNA and protein sequences, predicting genes, finding regulatory motifs, analyzing gene expression...3917 days ago
Tags
- PhD student in CECAD, Cologne.
Tags: non coding RNA, genetics, epigenetics, gene expression regulation
1533 days ago
