2218 days ago
1641 days ago
List of gene ontology software and tools
...gene annotation analysis, especially when performing comparative genomics tasks. WEGO along with two other tools, namely External to GO Query and GO Archive Query, are freely available for all...3731 days ago
Basic command-line to run BLAST
...[-negative_gilist filename] [-negative_seqidlist filename] [-entrez_query entrez_query] [-db_soft_mask filtering_alg...[-negative_gilist filename] [-negative_seqidlist filename] [-entrez_query entrez_query] [-db_soft_mask...2265 days ago
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2895 days ago
Awesome perl frameworks, libraries and software - PART 3
...ect-libs - Include modules libs automatically karpet/search-query-perl - Search::Query - polyglot query parsing jpl...ownloading TV and radio from BBC iPlayer jfhovinne/jFeed - jQuery RSS/ATOM feed parser plugin...2515 days ago
Awesome perl frameworks, libraries and software - PART 4
...isucon - isucon web applications and tools perl6/doc - Perl 6 documentation (tools and docs) hirose31/redis-traffic-stats - Redis query analyzer for counting, traffi...2515 days ago
Great Place to Study Bioinformatics in Europe
...frankfurt.de/58444439/mabi Other links: http://www.masterstudies.com/Masters-Degree/Bioinformatics/Europe/ https://studyinsweden.se/programmes/?query=bioinformatics&period=ht-...3053 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ded project to create computational resources for plant biology research, provides access to cloud computing resources through Atmosphere SeqWare Query Engine: storing and searching...3800 days ago
3942 days ago
Conserved Domain Database (CDD) version 3.11 released
.... This abolishes the need to mask out compositionally biased regions in query sequences; Domain annota...“full” results. “Standard” results will provide, for each region on the query sequence, the best0-scoring d...3748 days ago
3969 days ago
Senior Scientist bioinformatics @ Eurofins Genomics India Pvt Ltd, Bengaluru.
...s, such as WGS, RNASeq, Small RNA, Metagenome (16S, ITS, Whole metagenome)etc. -Should also have good programming skills in perl or python, PHP,J Query, MySql. -Manage project time...1016 days ago
Beginners MYSQL Database Tutorial 1 # Download , Install MYSQL and first SQL query
...mysql install mysql macSearches related to install mysql and write query install mysql query browser mysql write query to...ert query in mysql how to write update query in mysql how to write query in mysql workbench how to wri...3669 days ago
Download genome using NCBI esearch command line !
...g command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -query "CP003784.1" | efetch -format...1122 days ago
R script to visualize fastANI core-genome comparison
...parison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org #Parse command line arguments query_fasta=commandArgs(TRUE)[1] s...1122 days ago
Web prgramming for biologist/bioinformatician
PHP is quite popular these days (in combination with mySQL (query and design db), CSS (for styling) and HTML) for web programming and online database management for publishing huge p...3657 days ago
Is Computational Biology a good field?
I wam wondering about computational biology field. Is this is a good field of study?Tags: query, what, computational biology, biology, computational
1215 days ago
Comment on "Basic command-line to run BLAST"
BLAST compares a query sequence to a database of known sequences and identifies the most similar...lationships between different organisms. BLAST works by breaking down the query sequence into smaller segment...442 days ago
Comment on "Basic command-line to run BLAST"
...tabase of sequences to find those that match a query sequence. Here are the genera...hoose the program that is appropriate for your query and database. Prepare th...p penalties. Perform the search: Once the query sequence and parameters have...444 days ago