Tools to detect synteny blocks regions among multiple genomes
...seful in studying genome duplication and evolution. It can also aid in identifying uncharacterized genes, putative regulatory elements and novel structural features of study species by...2609 days ago
Dynamic chromosome breakpoints !!!
...sorders are caused by the loss or gain of whole chromosomes, which affect the copy number of hundreds or even thousands of genes. The second are structural abnormalities which can be un...3552 days ago
A Brief Bioinformatics Tutorial
...nt of the homologues you've selected and how to edit this alignment. The Structure part is about molecular visualization, homology modeling and structural domain prediction. In the Fu...3636 days ago
3558 days ago
Bioinformatics approach to Boar Taint
...variant caller tool. A final list of SNPs was prepared after filtering SNPs on the basis of SNP quality, coverage of SNP allele, functional and structural annotation, and repeats, etc....3788 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowledge –based...3944 days ago
Bioinformatics in Africa: Part2 - Kenya
...arch interest: 1. EST clustering 2. Genome sequencing and annotation 3. Functional genomics and proteomics (including key tropical pathogens) 4. Structural bioinformatics 5. Development...1183 days ago
Bioinformatics in Africa: Part7 - Tunisia
...; trained human resources to strengthen bioinformatics capacities at CBS, particularly in structural bioinformatics. Web si...1182 days ago
3946 days ago
List of Bioinformatics and Computational Biology Journals
...Journal of Computational Intelligence in Bioinformatics Journal of Structural and Functional Genomics Jour...Mining and Knowledge Discovery The EMBO Journal Current Opinions in Structural Biology Journal of Molecular...3727 days ago
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Structural polymorphism analysis from NGS data
...on, gene/protein expression and phenotypic adaptation. The successful candidate will be in charge of the detection of polymorphisms including structural variants, of the comparison o...3948 days ago
Scientist Fellow-Bioinformatics
...tist Fellow-Bioinformatics(01-Position). Essential Qualifications: Ph.D. in Computational biology/Bioinformatics. Desirable: Experience in structural bioinformatics,network biolog...3943 days ago
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3868 days ago
Interview Mark Sansom (U. Oxford): Simulations of Membrane Proteins
...a the Workshop in Bioinformatics. This event addressed issues such as structural bioinformatics, biological mo...data. Professor Mark Sansom (University of Oxford), belonging to the Structural Bioinformatics and Computatio...3862 days ago
Celebrating Crystallography - An animated adventure
...h the 100 year history of crystallography -- from the pioneering work of William and Lawrence Bragg in 1913 to the surface of Mars! Narrated by structural biologist Stephen Curry and p...3473 days ago
2074 days ago
Pack a perl program with their dependencies on Ubuntu !
...GSP4PDB: a web tool to visualize, search and explore protein-ligand structural patternsBy Neelam Jha yesterday GSP4PDBwebtoolvisualizesearchexploreprotein-ligandstructuralpatterns gdblab.com -...1510 days ago
3919 days ago
TARDIS: Toolkit for automated and rapid discovery of structural variants
tardis Toolkit for Automated and Rapid DIscovery of Structural variants Requirements zlib (http://www.zlib.net)mrfast (https://github.com/BilkentCompGen/mrfast)htslib (included as submodule; http://htslib.org/)Fetching tardis git clone https://github.com/BilkentCompGen/tardis.git --recursive ...Tags: TARDIS, Toolkit, automated, rapid, discovery, structural, variants
2521 days ago
Tags: Manta, rapid, detection, structural, variants, indels, germline, cancer, sequencing, applications
2168 days ago
Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end an...lumpy: a general probabilistic framework for structural variant discovery. [ paper-2014 ] manta – Structural variant and indel caller for...1141 days ago
Comment on "List of genome announcement, notes and reporting journals"
Computational and Structural Biotechnology Journal for bioinformatics tool publication1225 days ago