Results for "summary"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...p; | 2.4 MB 00:00Setting up Install ProcessParsing package install argumentsResolving DependenciesTransaction Summary==============================...3954 days ago
Tools to detect synteny blocks regions among multiple genomes
.../cookbooks/nikob/exercises/gf1_output_5.html), Ensembl 'SyntenyView' shows conservation of large-scale gene order between species pairs. A brief summary of the calculation method app...2615 days ago
- +4 more Blogs
Bookmarks
- An ultra–high-performance protein–protein docking software for heterogeneous supercomputers Summary: The application of protein–protein docking in large-scale inter...
3563 days ago
- ...ces data, ALE identifies 12 of 12 synthetic errors in a Lambda Phage genome, surpassing even Pacific Biosciences' own variant caller, EviCons. In summary, the ALE framework provides a...
2936 days ago
- +17 more Bookmarks
Pages
Check the Size of a directory & Free disk space.
...the last line of the output. So if your directory occupies 30MB the last 2 lines of the output would be 30M.$ du -sUse this command to displays a summary of the directory size. It is...3707 days ago
A guide for complete R beginners :- Getting data into R
...(columns) are identified by their name #if any of these are typed it will print to screen mydata$A mydata$B mydata$C # Summary about the whole data frame summary(mydata) # Summary informat...3362 days ago
Top-level pages
Apps for Busy Bioinformatics Researchers !!!
...al) system is used to identify all published molecular time estimates bearing on the divergence of two chosen organisms, such as species, compute summary statistics, and present the r...3546 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...PED, TPED, BED, Agilent files, NimbleGen data summary files, VCF files, Impute2 GWA...Data file, Map file (includes rsID) Output: Summary file, Best model file, dot fi...nvar_2014072 Input: VCF Output: TIMS score, summary table, PCA plot GSITIC...2913 days ago
- +2 more Top-level pages
News
R package for visualising GO enrichment
...ualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for analyses such as di...3944 days ago
- ...ors, and the defaults have been changed accordingly. Functions in the Summary group duplicate less. (PR#157...rint methods, e.g. those for classes "density", "ecdf", "stepfun" and "summary.lm". getOption("OutDec") is...
3310 days ago
Opportunity posts
Postdoc position at Centre Méditerranéen de Médecine Moléculaire - Nice - France
...omedical research. Interested applicants should send a PDF with a cover letter stating research interests and qualifications, an updated CV, a summary of previous research experien...3627 days ago
Postdoc position at Centre Méditerranéen de Médecine Moléculaire
...biomedical research. Interested applicants should send a PDF with a cover letter stating research interests and qualifications, an updated CV, a summary of previous research experien...3595 days ago
- +12 more Opportunity posts
Bio-Scripts
Download the genome from NCBI using bash script/command
...# Look for genome assembly summary and extract the URL # USER need to provide the right summary file to curl # Commentline...genomes/refseq/fungi/assembly_summary.txt' | awk '{FS="\t"} !/^#/ {...vertebrate_mammalian/assembly_summary.txt' | awk '{FS="\t"} !/^#/ {...2536 days ago
Download the gff files from NCBI using bash script/command
...# Look for genome assembly summary and extract the URL # USER need to provide the right summary file to curl # Commentline...mes/genbank/bacteria/assembly_summary.txt' | awk '{FS="\t"} !/^#/ {.../refseq/invertebrate/assembly_summary.txt' | awk '{FS="\t"} !/^#/ {...2527 days ago
- +7 more Bio-Scripts
Tags
- We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during annotation jamborees, genome comparison and for use by developers for rapid feedback during annotation software deve...
Tags: Sequence, Ontology, Bioinformatics, Analysis, SOBA, tool, statistical, graphical, summary, annotated, genome
1387 days ago
gfastats: The swiss army knife for genome assembly.
gfastats is a single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation. gfastats also allows seamless fasta<>fastq<>gfa[.gz] conversion. It has been tested in genomes even >...Tags: gfastats, summary, statistics, simultaneous, fasta, fastq, gfa
609 days ago
Comments
Comment on "Benchmarking Perl Module !"
...can also use other functions from the Benchmark module, such as cmpthese, to compare the performance of multiple modules or subroutines. In summary, benchmarking a Perl module i...420 days ago
Comment on "A quick guide to Phred scaling"
...he character code equal to the Phred score plus 33. For example, a Phred score of 20 is represented by the ASCII character "!" (33 + 20). In summary, Phred scaling is a logarithm...420 days ago
- +4 more Comments
