BOL

Long reads: their purpose and place https://academic.oup.com/hmg/article/27/R2/R234/4996216 #Long #reads #informations

Rename the fasta header perl -ane 'if(/\>/){$a++;print ">LR$a\n"}else{print;}' allPacBio_clean.fa > allPacBio_clean_shortName.fa #fasta #header #rename

Bioinformatics jobs at CUJ, Jharkhand http://www.cuj.ac.in/downloads/advtbuilderDLS25oct2018.pdf #Job

Visualize the chromosomes http://visualization.ritchielab.org/ #PhenoGram

http://www.bioconductor.org/packages/release/bioc/vignettes/Gviz/inst/doc/Gviz.pdf #Plot #Chr

Bash scripting cheatsheet https://devhints.io/bash #Bash #CheatSheet #Script

http://www.jaduniv.edu.in/upload_files/scroll_info/1537868817.pdf Bioinformatics #Jobs

Bioinformatics jobs at http://actrec.gov.in/data%20files/Vacancies/2018/ACTREC-Advt-74-2018.pdf #ACTREC #Job #Bioinformatics

Variant calling workflow http://www.htslib.org/workflow/ #Variant #Calling #Tutorial

Variant calling https://www.ebi.ac.uk/training/online/course/human-genetic-variation-i-introduction/variant-identification-and-analysis/what-variant #variant #snp #tutorial

AB1 file format http://www6.appliedbiosystems.com/support/software_community/ABIF_File_Format.pdf #AB1 #File #Format

Bioinformatics online tutorial https://www.gvl.org.au/learn/ #Tutorial #Online #Learn

Bioinformatics tutorial http://sepsis-omics.github.io/tutorials/ #Bioinformatics #Tutorial #Learn

Tab file to FASTA file $ awk '{print ">"$1"\n"$2}' allSeq_tm.txt > allSeq_tm.fa #Fasta #Tab #Convert #Tab2Fasta

http://www.bioconductor.org/packages/release/bioc/vignettes/BSgenome/inst/doc/GenomeSearching.pdf #Genome #Search #Mask