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The Wire
#snp
Wire posts tagged with 'snp'
Jit
@jit.aber
Thread
By
Jit
1552 days ago
NGS alignment and variant calling tutorial
https:/
/
github.com/
ekg/
alignment-and-variant-calling-tutorial
#NGS
#variant
#snp
#tools
#tutorial
#calling
LEGE
@lege
Thread
By
LEGE
1616 days ago
One can evaluate the accuracy of a mapper or a SNP caller with wgsim_eval.pl that comes with the package.
#Evaluate
#Mapping
#SNP
Jit
@jit.aber
Thread
By
Jit
1896 days ago
polySNP: an analysis tool for quantitative sequencing
https:/
/
www.nybg.org/
files/
scientists/
dlittle/
polySNP.html
#SNP
#polySNP
#analysis
#peak
#Area
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2012 days ago
Variant calling
https:/
/
www.ebi.ac.uk/
training/
online/
course/
human-genetic-variation-i-introduction/
variant-identification-and-analysis/
what-variant
#variant
#snp
#tutorial
Neelam Jha
@neelam
Thread
By
Neelam Jha
2109 days ago
https:/
/
gatkforums.broadinstitute.org/
gatk/
discussion/
1268/
what-is-a-vcf-and-how-should-i-interpret-it
#VCF
#vcf
#SNP
Jit
@jit.aber
Thread
By
Jit
2201 days ago
Bioinformatics tutorial
https:/
/
jasonjwilliamsny.github.io/
wrangling-genomics/
01-automating_a_workflow.html
#Workflow
#Tutorial
#BAM
#SAM
#SNP
Abhimanyu Singh
@abhimanyu
Thread
By
Abhimanyu Singh
2838 days ago
#FreeBayes
tool for
#SNP
http:/
/
weatherby.genetics.utah.edu/
UGP/
wiki/
index.php/
FreeBayes_Variant_Protocol#Local_Realignment_of_Indels
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3215 days ago
http:/
/
bioinfo.life.hust.edu.cn/
lncRNASNP/
#long
#noncodingRNA
#SNP
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3364 days ago
http:/
/
csg.sph.umich.edu/
kang/
MetaboChip/
#SNP
#metabolic
#atherosclerotic
#cardiovascular
#disease
#traits
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3459 days ago
http:/
/
manuals.bioinformatics.ucr.edu/
workshops
#NGS
#R
#ChemInfo
#RNA
#ChiP
-Seq
#DNA
#SNP
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3479 days ago
Pool-seq
http:/
/
www.nanowerk.com/
news2/
biotech/
newsid=37776.php
#Pool
-seq
#aging
#Evolution
#Selection
#snp
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3487 days ago
http:/
/
sourceforge.net/
projects/
atlas2/
#SNP
#Exome
#Indels
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3538 days ago
WGS/WES Mapping to Variant Calls - Version 1.0!
http:/
/
www.htslib.org/
workflow/
#Omics
#NGS
#WGS
#SNP
John Parker
@parker
Thread
By
John Parker
3546 days ago
galign: A Tool for Rapid Genome Polymorphism Discovery
http:/
/
www.ncbi.nlm.nih.gov/
pmc/
articles/
PMC2746318/
#SNP
#Variation
#galign
#Genome
John Parker
@parker
Thread
By
John Parker
3546 days ago
Validated whole genome structural variation detection using multiple callers
http:/
/
bcbio.wordpress.com/
#VariationCalling
#Genome
#SNP
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