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The Wire
#NGS
Wire posts tagged with 'NGS'
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
2642 days ago
http:/
/
www.festivalofgenomicslondon.com/
#biopharma
#academia
#healthcare
#gemonics
#ngs
#omics
Jit
@jit.aber
Thread
By
Jit
2642 days ago
interleave fastq files
https:/
/
gist.github.com/
nathanhaigh/
4544979
#interleave
#fastq
#pair
#ngs
#reads
Jit
@jit.aber
Thread
By
Jit
2664 days ago
Beginner’s guide to comparative bacterial genome analysis using next-generation sequence data
https:/
/
www.ncbi.nlm.nih.gov/
pmc/
articles/
PMC3630013/
#Bacteria
#NGS
#Comparative
#Genomics
Jit
@jit.aber
Thread
By
Jit
2702 days ago
Get the reads in fastq file: awk '{s++}END{print s/4}' file.fastq
#reads
#count
#ngs
#fastq
Jit
@jit.aber
Thread
By
Jit
2833 days ago
Find a pattern in first 7 characters of reads. bioawk -c fastx 'substr($seq,0,7) == $TAG { print }' reads.fq.gz
#Reads
#NGS
#Extract
#Pattern
Jit
@jit.aber
Thread
By
Jit
2863 days ago
All about
#newbler
#assembly
https:/
/
contig.wordpress.com/
#NGS
Jit
@jit.aber
Thread
By
Jit
2892 days ago
Perl OneLiner
http:/
/
userweb.eng.gla.ac.uk/
umer.ijaz/
bioinformatics/
oneliners.html
#Perl
#Oneliner
#NGS
#Script
Jit
@jit.aber
Thread
By
Jit
2892 days ago
NGS onliner
http:/
/
userweb.eng.gla.ac.uk/
umer.ijaz/
bioinformatics/
subsetFASTAFASTAQ.html
#OneLiner
#NGS
Robert M Willioms
@robert
Thread
By
Robert M Willioms
2918 days ago
Plotting nice coverage graph with R
https:/
/
davetang.org/
muse/
2013/
09/
07/
creating-a-coverage-plot-in-r/
#R
#Plot
#Coverage
#NGS
Neel
@neelam
Thread
By
Neel
2924 days ago
Ion Torrent white paper:
https:/
/
tools.thermofisher.com/
content/
sfs/
manuals/
CO25176_0512.pdf
#NGS
#Ion
#Torrent
#Steps
Abhimanyu Singh
@abhimanyu
Thread
By
Abhimanyu Singh
2948 days ago
Assembly comparison
https:/
/
github.com/
WGLab/
uniline/
tree/
master/
src/
assembly_comparison
#NGS
#Assembly
#MUMMer
Jit
@jit.aber
Thread
By
Jit
3026 days ago
NGS tutorial
http:/
/
userweb.eng.gla.ac.uk/
umer.ijaz/
bioinformatics/
linux.html
#NGS
#Tutorial
#Example
Hardeep Kaur
@hardeep
Thread
By
Hardeep Kaur
3054 days ago
Genome and coverage
https:/
/
rtsf.natsci.msu.edu/
_rtsf/
assets/
File/
depth%20and%20coverage.pdf
#Coverage
#Genome
#Depth
#Reads
#NGS
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
3081 days ago
Coverage R Plot
http:/
/
davetang.org/
muse/
2013/
09/
07/
creating-a-coverage-plot-in-r/
#R
#Plot
#Genome
#Image
#NGS
#BAM
Archana Malhotra
@archana
Thread
By
Archana Malhotra
3148 days ago
NGS exercise
http:/
/
wiki.bits.vib.be/
index.php/
NGS_Exercise.5
#NGS
#VIB
#Training
#Exercise
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