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• • Neel@neelam

  

  Neel published a news post You can't hide from Genome Hackers 2891 days ago

  Young computational biologist named Yaniv Erlich shocked the research world by showing it was possible to unmask the identities of people listed in anonymous genetic databases using only an Internet connection
• • Neel@neelam

  

  Neel created a new bio-script Perl script to create a consensus of nucleotide sequences ! 2892 days ago
• • Neel@neelam

  

  Neel posted to the wire 2892 days ago

  Next generation error correction https://lib.dr.iastate.edu/cgi/viewcontent.cgi?article=6104&context=etd #Error #Correct #NGS #Algorithms
• • Neel@neelam

  

  Neel posted to the wire 2892 days ago

  Generate consensus from BAM file samtools mpileup -uf chr5B_leaf_rust.fasta M27454_5B_reads_sorted.bam | bcftools call -c | vcfutils.pl vcf2fq #BAM #Consensus
• • Neel@neelam

  

  Neel posted to the wire 2892 days ago

  Consensus of nucleotide sequences https://www.perlmonks.org/bare/?node_id=500962 #Consensus #Nucleotide #DNA
• • Neel@neelam

  

  Neel bookmarked DNA Nucleotide Counter 2892 days ago

  DNA Nucleotide Counter is delivered in a DNA Baser package together with other free molecular biology tools. Download the package and double click it. The programs inside the package will be extracted to the destination folder (specified...

  http://www.dnabaser.com/download/DNA-Counter/index.html
• • Jit@jit.aber

  

  Jit created a new bio-script Test bp-assembly ! 2894 days ago
• • Neel@neelam

  

  Neel posted to the wire 2895 days ago

  PacBio data to download http://www.cbcb.umd.edu/software/PBcR/original/index.html #pacbio #data
• • Jit@jit.aber

  

  Jit created a new bio-script Installing pb-assembly on Linux ! 2895 days ago
• • Rahul Nayak@rahul

  

  Rahul Nayak published a news post Phased Human Genome Assembly ! 2896 days ago

  Diploid Assembly of a Puerto Rican Female Adds a Rich Resource to Population-Specific Reference Genomes
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2896 days ago

  https://www.ebi.ac.uk/about/news/announcements/25-genomes-UK-species #Genomes #Sequenced #UK
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2896 days ago

  https://pb-falcon.readthedocs.io/en/latest/quick_start.html#quick-start #Falcon-Unzip #Genome #Assembly
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2897 days ago

  https://blog.rstudio.com/2018/10/05/r2d3-r-interface-to-d3-visualizations/ #r2d3 #visualization
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh commented on the blog List of gene ontology software and tools 2899 days ago

  GO::TermFinder http://gmod.org/wiki/GO::TermFinder
• • Jit@jit.aber

  

  Jit commented on a bookmark Long read assembly workshop ! 2899 days ago

  Long reads base bacterial genome assembly https://inf-biox121.readthedocs.io/en/2016/Assembly/practicals/07_Assembly_using_minasm+racon.html
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a bookmark nanofilt: Filtering and trimming of long read sequencing data 2900 days ago

  Nanofilt steps https://gigabaseorgigabyte.wordpress.com/2017/06/05/trimming-and-filtering-oxford-nanopore-sequencing-reads/
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a bookmark MEGAN6 2900 days ago

  Understanding Megan http://ab.inf.uni-tuebingen.de/data/software/megan6/download/MeganTutorialApril2018.pdf
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a bookmark Long read assembly workshop ! 2900 days ago

  Bacterial genome assembly tutorial http://evomics.org/learning/assembly-and-alignment/2017-assembly-lab/
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a bookmark Long read assembly workshop ! 2900 days ago

  Long reads assembly PPT https://www.msi.umn.edu/sites/default/files/Badalamenti_PacBio_tutorial_12-10-2014.pdf
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a bookmark Long read assembly workshop ! 2900 days ago

  Long reads assembler https://zenodo.org/record/345098/files/scientific_reports_assembly_long_reads%282%29.pdf

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