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• • Jit@jit.aber

  

  Jit posted to the wire 1340 days ago

  install PAR::Packer in unbuntu. $ sudo apt-get install libpar-packer-perl #pp #Perl #Ubuntu
• • Jit@jit.aber

  

  Jit bookmarked Public Databases for Bioinformatics ! 1340 days ago

  https://www.nature.com/articles/s41467-020-17155-yServer Infrastructure: File Server: dhara: Synology 3614 Storage Appliance 4 Core Xeon 108TB disk storage 10Gb ethernet to SCG3 Access atx: dhara:5000 Has btsync server (try it - its much...

  http://mitra.stanford.edu/
• • Jit@jit.aber

  

  Jit bookmarked Janggu - Deep learning for Genomics 1340 days ago

  Janggu is a python package that facilitates deep learning in the context of genomics. The package is freely available under a GPL-3.0 license. Detail tutorial at https://janggu.readthedocs.io/en/latest/ USE...

  https://github.com/BIMSBbioinfo/janggu
• • Ravindra Raut@Ravi

  

  Ravindra Raut has a new avatar 1341 days ago

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan is now a friend with Ravindra Raut 1341 days ago

  • Jitendra Narayan@admin

  

  • Ravindra Raut@Ravi

  
• • Ravindra Raut@Ravi

  

  Ravindra Raut is now a friend with Jitendra Narayan 1341 days ago

  • Ravindra Raut@Ravi

  

  • Jitendra Narayan@admin

  
• • Neel@neelam

  

  Neel posted to the wire 1342 days ago

  Awesome Machine Learning https://github.com/josephmisiti/awesome-machine-learning#perl-data-analysis--data-visualization #AI #Machine #Learn #Teach #Repo
• • Rahul Nayak@rahul

  

  Rahul Nayak published a blog post List of bioinformatics packages for NGS analysis ! 1343 days ago

  Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software.
• • Rahul Nayak@rahul

  

  Rahul Nayak published a blog post List of bioinformatics workflow management tools ! 1343 days ago

  Workflow Managers
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a page titled List of non-commercial NGS genotype-calling software 1343 days ago

  Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabilistic framework for structural variant discovery....
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a page titled Bioinformatics Companies in India 1343 days ago

  Bioinformatics startup https://www.genique.co/
• • Jit@jit.aber

  

  Jit commented on a bookmark DAVI: Deep learning-based tool for alignment and single nucleotide variant identification 1347 days ago

  DeepConflation based CNN model is used to generate alignment of fasta file . Model try to match a query string in a referance genome to provide location of match. https://github.com/gguptaiitd/DeepConflation
• • Jit@jit.aber

  

  Jit bookmarked Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation 1347 days ago

  We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nearest neighbor for the alignment.With our new approach we have...

  https://prakharg24.github.io/papers/401851.full.pdf
• • Jit@jit.aber

  

  Jit bookmarked DAVI: Deep learning-based tool for alignment and single nucleotide variant identification 1347 days ago

  DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools...

  https://github.com/gguptaiitd/NEAT

  Comments

  • • Jit@jit.aber

    

    Jit 1347 days ago

    DeepConflation based CNN model is used to generate alignment of fasta file . Model try to match a query string in a referance genome to provide location of match.

    https://github.com/gguptaiitd/DeepConflation
• • Neel@neelam

  

  Neel posted to the wire 1347 days ago

  http://tmbuniv.ac.in/wp-content/uploads/2019/10/Admission-notice.pdf #Bioinformatics #Bihar #TBU
• • Jit@jit.aber

  

  Jit posted a new ad in the ResearchLabs Claus-Peter Stelzer Lab 1348 days ago
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra created a new bio-script Install BLAST in Ubuntu/Linux and Window ! 1348 days ago
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra posted a new ad in the Opportunity Post-doctoral position / Scientist (m/f/d) in Bioinformatics 1348 days ago
• • Rahul Nayak@rahul

  

  Rahul Nayak posted a new ad in the Opportunity RA Bioinformatics at Sir Ganga Ram Hospital, New Delhi 1349 days ago
• • Jit@jit.aber

  

  Jit answered the question How to fiv "Error in library(reshape) : there is no package called ‘reshape’" 1349 days ago

  I guess, installing reshape package will fix it ! install.packages("reshape").

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