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• • Jit@jit.aber

  

  Jit answered the question Rasflow Error: Directory cannot be locked 1643 days ago

  You can also just remove .snakemake/locks/* OR Try snakemake --unlock
• • Neel@neelam

  

  Neel asked Rasflow Error: Directory cannot be locked 1643 days ago

  Error: Directory cannot be locked. Please make sure that no other Snakemake process is trying to create the same files in the following directory:/home/RASflowIf you are sure that no other instances of snakemake are running on this directory, the...
• • Jit@jit.aber

  

  Jit commented on the bio-script Basic docker commands ! 1643 days ago

  Start the docker container docker start [options] container_id Stop the docker container docker stop --time=20 container_id Kill a docker container docker kill [option] container_id
• • Jit@jit.aber

  

  Jit commented on the bio-script Basic docker commands ! 1643 days ago

  Attached the running docker  Instead of using -i or -t options, use the attach command to connect to a running container: docker attach container_id
• • Jit@jit.aber

  

  Jit bookmarked JUDI: Just Do It 1643 days ago

  judi comes from the idea of bringing the power and efficiency of doit to execute any kind of task under many combinations of parameter settings. https://github.com/ncbi/JUDI

  https://github.com/ncbi/JUDI
• • LEGE@lege

  

  LEGE created a new bio-script Tadpole is 250x faster than SPADes assembler ! 1647 days ago
• • LEGE@lege

  

  LEGE created a new bio-script Remove dupcates in multifasta file ! 1647 days ago
• • LEGE@lege

  

  LEGE posted to the wire 1647 days ago

  Count number of fasta sequence $ awk '/^>/ { f = !a[$0]++ } f' aaaa.fa > bbbb.fa #count #fasta #oneliner
• • LEGE@lege

  

  LEGE posted to the wire 1647 days ago

  Snakemake pipeline https://git.scicore.unibas.ch/zavolan_public/A-seq2-processing #A-Seq2 #Snakemake
• • LEGE@lege

  

  LEGE created a new bio-script Python script to read FASTA and FASTQ file ! 1647 days ago
• • Jit@jit.aber

  

  Jit posted to the wire 1648 days ago

  #NLP-MeTaxa: A Natural Language Processing Approach for #Metagenomic #Taxonomic #Binning Based on Deep Learning https://github.com/padriba/NLP_MeTaxa/
• • Jit@jit.aber

  

  Jit posted a new ad in the Opportunity Nigerian Bioinformatics and Genomics Network (NBGN) 1649 days ago
• • Neel@neelam

  

  Neel created a new bio-script Print in terminal with python ! 1649 days ago
• • Jit@jit.aber

  

  Jit posted to the wire 1649 days ago

  Understanding Covid variant https://sangerinstitute.blog/2021/06/29/covid-connections-variant-or-villain/ #Covid #Variant #Disease #SARS-Cov2
• • Neel@neelam

  

  Neel commented on the bio-script Estimate Genome Size with Jellyfish and R 1652 days ago

  Jellyfish manual at http://www.genome.umd.edu/docs/JellyfishUserGuide.pdf
• • Neel@neelam

  

  Neel created a new bio-script Install Jellyfish on Linux ! 1652 days ago
• • Jit@jit.aber

  

  Jit posted to the wire 1652 days ago

  #Ten simple #rules for organizing a #bioinformatics #training #course in low- and #middle-income countries https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009218
• • Jit@jit.aber

  

  Jit posted a new ad in the Opportunity Postdoc position at Kiel University, Germany 1652 days ago
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary created a new bio-script List of string comparison algorithms ! 1653 days ago
• • Neel@neelam

  

  Neel posted to the wire 1653 days ago

  Bioinformatics summit at Delhi, India https://webs.iiitd.edu.in/hitsummit/ #Free #Summit #HIT #Health

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