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Creates 100 random DNA sequences with 20 residues. sapply(1:100, function(x) paste(sample(c("A","T","G","C"), 20, replace=T), collapse="")) #R #Random #Sequence #DNA #Script

Related latest article: http://www.nature.com/nature/journal/v509/n7502/pdf/nature13377.pdf

KITLG -blond hair gene!! http://news.sciencemag.org/biology/2014/06/genetics-blond-hair?rss=1 #genetics #SNP

Smaller Exome datasets were found to be worse performer than those from larger datasets (WGS)

Roche acquires Genia Technologies!! http://www.roche.com/media/media_releases/med-cor-2014-06-02.htm #Seq #Omics

Load the ShortRead and BiocParallel packages for NGS data analysis in R #bioconductor #R #qualitycheck

Useful R resources @ http://www.stat.wisc.edu/network-skills/learnR #R #Stats #Learn #Tutorial #Material #Learn #Course

Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

To deal with simple CSV: awk -F, '{print $1,$2}'

Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space efficiency GNU sort stands at the top. It can sort a 20Gb file with less...