Agampreet Kaur commented on an answer to a question 4451 days ago
Hi Bhavana,
There are many software to this work for you. They have cached libraries to describe common bond types. The tag "CONECT" to describe the specific connectivity of exogenous molecules. I recommend you to read about mol format defined here...
Poonam Mahapatra commented on an answer to a question 4451 days ago
Hi Bhavana,
There are several software available online for your job. You can find links, which includes free software for 3D molecular visualization. My favourate tool for molecular-graphics, modeling and simulation program powered by PVL...
RAJESH DETROJA commented on an answer to a question 4451 days ago
First to open and visualize protein structure you use any one of this tools : RASMOL,JMOL,SPDBV,Cn3D,Chimera, DSViewerPro60, PyMOL.
if you want to identify the chain,ring,atoms and specific part of the percular protein molecule then in the...
This paper http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003554 explain the Structural Systems Pharmacology to Study Complex Diseases and Personalized Medicine in detail.
Hi Bhavana,
There are many software to this work for you. They have cached libraries to describe common bond types. The tag "CONECT" to describe the specific connectivity of exogenous molecules. I recommend you to read about mol format defined here...
Hi Sir,
I use many of your web server/tool in our day to day research work. Some of them are
http://www.imtech.res.in/raghava/proprint/
http://www.imtech.res.in/raghava/pslpred/
http://www.imtech.res.in/raghava/gpcrpred/
Thanks for developing...