Abhimanyu Singh
A bioinformatics beginner
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Step-by-Step Guide to Running Genome Assembly
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By Jit 3163 days agosourceforge.net - Sept. 20, 2017 Version 3.1 released. Major upgrade. Version 3.1 fixes the problems with SNP annotation that arose when NCBI discontinued use of GI numbers. Please read carefully the Preface (page 3) and the File of annotated genomes section (pages...Platypus – R package for object detection and image segmentation.
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By Rahul Nayak 3305 days agomulan.dcode.org - Mulan performs multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitulation of evolutionary sequence rearrangements (such as inversions and reshuffling) in any of the species. It...CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
By Jit 3300 days agowebchem.ncbr.muni.cz - Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide sequences of different pieces of DNA. The Basic Local Alignment Search Tool (BLAST) has revolutionized...GSP4PDB: a web tool to visualize, search and explore protein-ligand structural patterns
By Neel 2336 days agogdblab.com - GSP4PDB is a user-friendly and efficient application to search and discover new patterns of protein-ligand interaction. GSP4PDB is part of the services provided by the Bioinformatic Group of the University of...Syri compares alignments between two chromosome-level assemblies and identifies synteny and...
By Shruti Paniwala 1528 days agogithub.com - Syri compares alignments between two chromosome-level assemblies and identifies synteny and structural rearrangements.
