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DNA Nucleotide Counter
By Neel 2264 days agowww.dnabaser.com - DNA Nucleotide Counter is delivered in a DNA Baser package together with other free molecular biology tools. Download the package and double click it. The programs inside the package will be extracted to the destination folder (specified...Shasta long read assembler
By Jit 1805 days ago Comments (1)github.com - The goal of the Shasta long read assembler is to rapidly produce accurate assembled sequence using as input DNA reads generated by Oxford Nanopore flow cells. Computational methods used by the Shasta assembler include: Using...wgd—simple command line tools for the analysis of ancient whole-genome duplications
By LEGE 1614 days agogithub.com - wgd is a easy to use command-line tool for KS distribution construction named wgd. The wgd suite provides commonly used KS and colinearity analysis workflows together with tools for modeling and visualization, rendering these...Breeding Insight
By BioStar 1446 days agowww.breedinginsight.org - Breeding Insight at Cornell University will leverage recent improvements in genomics and open source informatics components, and in partnership with small breeding programs, will enable these programs to harness powerful digital...Kmer: a suite of tools for DNA sequence analysis
By BioStar 1223 days agohelp.rc.ufl.edu - More at https://help.rc.ufl.edu/doc/Kmer This also includes: A2Amapper: ATAC, Assembly to Assembly Comparision tool: Comparative mapping between two genome assemblies (same species), or between two different genomes (cross...Upset plots !
By BioStar 639 days agojokergoo.github.io - Upset plots are a type of visualization used to analyze the intersection of sets or categories. They are particularly useful for displaying data with multiple categories and analyzing their overlaps. In an upset plot, each row represents a category...BioKit: a set of tools dedicated to bioinformatics, data visualisation
By Neel 188 days agobiokit.readthedocs.io - BioKit is a set of tools dedicated to bioinformatics, data visualisation (biokit.viz), access to online biological data (e.g. UniProt, NCBI thanks to bioservices). It also contains more advanced tools related to data analysis...Bioinformatics -- Understanding of living systems through information science
By Jitendra Narayan 4149 days agoRecently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics. In this new field, computers and techniques from information science are not just used as tools to...ForBio and UiB course: Introduction to phylogenetic methods
By Rahul Nayak 1834 days agoThe is an introductory course that is aimed at students who will need to preform phylogenetic analyses in their work, but who have little or no experience with phylogenetic analyses.
