Jitendra Narayan
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Refseq viraal genome sequences !
By Jit 1759 days agoftp.ncbi.nlm.nih.gov - List of all viruses on NCBI https://ftp.ncbi.nlm.nih.gov/refseq/release/viral/CrossMap: program for genome coordinates conversion between different assemblies
By Rahul Nayak 1713 days ago Comments (1)crossmap.sourceforge.net - CrossMap is a program for genome coordinates conversion between different assemblies (such as hg18 (NCBI36) <=> hg19 (GRCh37)). It supports commonly used file formats...Comparative genomics visualisation tools !
By Neel 1691 days agocmdcolin.github.io - Comparative genomics visualisation tools !The complete sequence of a human genome
By Neel 1648 days agowww.science.org - The completed regions include all centromeric satellite arrays, recent segmental duplications, and the short arms of all five acrocentric chromosomes, unlocking these complex regions of the genome to variational and functional studies.
Mitochondrial genome assembly tools !
Last updated 1125 days ago by AbhiMitochondrial genome assembly tools are specialized software and algorithms designed to accurately reconstruct the mitochondrial genome (mitogenome) from sequencing data, typically obtained through techniques like next-generation sequencing (NGS)....When Chromosomes Shift: Understanding Chromosome Rearrangement and Human Disease
By BioStar 542 days agoIn the vast and complex world of genetics, our chromosomes are like carefully arranged bookshelves — each holding critical information that defines who we are. But what happens when those books are shuffled, inverted, or swapped? The answer lies in...
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4828 days ago320000 viruses in mammals yet to sequenced in future!!!
By Rahul Agarwal 4780 days ago70 per cent of emerging viral diseases such as HIV/AIDS, West Nile, Ebola, SARS, and influenza, are zoonoses - infections of animals that cross into humans.Genome + Epigenome = New Understanding of the Pathogens in Your Food
By Jitendra Narayan 4756 days agoUC Davis's Bart Weimer describes foodborne pathogens and their proclivity for rapid genome rearrangement. The 100K Pathogen Genome Project he leads is using PacBio long-read sequencing to close genomes and analyze methylation; Weimer reports that...Bioinformatician duties and jobs !!!
By Jitendra Narayan 4597 days agoNeedle in a haystack ... ohh yes this is what bioinformatician do. We handle and analyse, Terabytes and Petabytes of genomic data on daily basis.
