1377 days ago
IRscope: an online program to visualize the junction sites of chloroplast genomes
eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.1284 days ago
1215 days ago
Kmer: a suite of tools for DNA sequence analysis
...sim4cc) species. Optimized for high-throughput batched alignment. LEAFF: LEAFF (ahem, Let's Extract Anything From Fasta) is a utility program for working with multi-fasta...1019 days ago
CrossMap: program for genome coordinates conversion between different assemblies
CrossMap is a program for genome coordinates conversion between different assemblies (such as hg18 (NCBI36) <=> hg19 (GRCh37)). It supports comm...858 days ago
SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
A general-purpose program to manipulate and parse information from FASTA/FASTQ files, supporting gz...n sequence lengths. SeqFu is available for Linux and MacOS. A compiled program delivering high performance a...824 days ago
503 days ago
PhyloHerb: A highâthroughput phylogenomic pipeline for processing genome skimming data
...or Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimmi...ic regions, and a species tree. It is designed to be a high throughput program dealing with lower quality da...270 days ago
PhyloHerb: Phylogenomic Analysis Pipeline for Herbarium Specimens
What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from p...ic regions, and a species tree. It is designed to be a high throughput program dealing with lower quality da...102 days ago
CGView.js is a Circular Genome Viewing tool
...s is a Circular Genome Viewing tool for visualizing and interacting with small genomes. This software is an adaptation of the Java program CGView. CGView.js is...67 days ago