3549 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...rocess takes place? [/root/.cpan/build]Always commit changes to config variables to disk? [no]Cache size for build directory (in MB)? [100]Let the index expire after how many days? [...4004 days ago
Tools to detect synteny blocks regions among multiple genomes
...ster-a-new-tool-for-mining-syntenic-blocks) A new tool for mining syntenic blocks in comparative genomics SynMap (http://genomevolution.org/wiki/index.php/SynMap), SyMAP (http://w...2664 days ago
Download mutliple fasta file from NCBI in one GO!!
...$i{$_}=1 if @ARGV' GIs.txt >sequence.fasta where GIs.txt contains a list of GIs or accession IDs. (from :http://edwards.sdsu.edu/labsite/index.php/robert?start=5)3964 days ago
Latest paper on comparison of mapping tools
...sfast.sourceforge.net/Home http://sourceforge.net/projects/mrsfast/files/mrsfast-ultra-3.1.0/ BFAST http://sourceforge.net/apps/mediawiki/bfast/index.php?title=Main_Page SHRiMP (...3951 days ago
2205 days ago
Bio++ : C Language libraries for your biological need
...e + physico-chemical distance (Miyata and Grantham) + import from any AAIndex entry.Consensus sequences.Pai...n/bioinfo/Tutorial on Bio++http://162.38.181.25/BioPP/articles/tutorial/index.htmlDownload Linkshttp://162....4002 days ago
3975 days ago
4000 days ago
Phylogenetic for Bioinformatics
...nformatics programs to reconstruct a robust phylogenetic tree from a set of sequences. For more detail : http://www.phylogeny.fr/version2_cgi/index.cgi A Brief Tutorial on Phyl...4000 days ago
3924 days ago
Programming language to build synthetic DNA
A team led by Georg Seelig (http://homes.cs.washington.edu/~seelig/index.html) at University of Washington has developed a programming language for chemistry that it hopes...3924 days ago
Structural polymorphism analysis from NGS data
...nce of produced datasets with pipelines requirements. He/she will be hosted by a bioinformatics/informatics team (7 people) (http://moulon.inra.fr/index.php/fr/equipestransversales/a...4003 days ago
NIT Calicut Faculty Jobs 2013 in Bioinformatics
...conditions stated earlier. The Institute has adopted 4-tier flexible faculty structure recommended by MHRD. More Info : http://www.nitc.ac.in/index.php/?url=content/submenu/2345...3900 days ago
4002 days ago
3962 days ago
RNA interference (RNAi): by Nature Video
...bout the structures and processes you see in this video, check out the accompanying slideshow: http://www.nature.com/nrg/multimedia/rnai/animation/index.html3947 days ago
3756 days ago
2963 days ago
Perl script introduces control structures, arrays and hashes.
...irst_array); my $another_way_of_getting_size_of_array = @first_array; # implicit way print "Scalar of array: $size_of_array\n\n"; print "Perl's index size of array: $#first_array\...2916 days ago
3760 days ago
3758 days ago
PuffAligner: a fast, efficient and accurate aligner based on the Pufferfish index
PuffAligner, a fast, accurate and versatile aligner built on top of the Pufferfish index. PuffAligner is able to produce highly sensitive alignments, similar to those of Bowtie2, but much more quickly. While exhibiting similar speed to the ultrafast STAR aligner, PuffAligner requires considerably...Tags: PuffAligner, fast, efficient, accurate, aligner, Pufferfish, index
799 days ago
Comment on "chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes"
More at https://lakshay-anand.github.io/chromoMap/index.html837 days ago
Comment on "Kraken: ultrafast metagenomic sequence classification using exact alignments"
Useful links https://genomics.sschmeier.com/ngs-taxonomic-investigation/index.html843 days ago