Results for "command"

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  • Taverna Workflow Management System

    ...rna Workbench(the desktop client application) and the Taverna Server (which allows remote execution of workflows). Taverna is also available as a Command Line Tool for a quick executi...

    3958 days ago

  • Bioinformatics Protocols

    ...on tools:* CuffDiff* EdgeR* DESeq2 Advanced Command Line Tutorial Graphical Output with CummeRbund introduces some basic commands using the cummeRbund package...those who are comfortable with using the UNIX command line; and often allow more co...

    3695 days ago

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  • Bioinformatics on the commandline http://www.vicbioinformatics.com/documents/command-line/#/ #R Bioinformatics #CommandLine #Commands #PPT

    3241 days ago

  • Want to Moves Your Home Directory to a Black Hole then only use this command mv ~ /dev/null #Command #Linux #Script #Move #Blackhole

    3207 days ago

  • +9 more Wire posts

News

  • Linux operating system aimed at scientists

    ...Linux distribution is aimed at scientists and it comes with more than 250 bioinformatics packages, 50 graphical applications and several hundred command line tools. And this is just...

    3436 days ago

  • R 3.2.0 is released

    ...-alikes.) system(cmd, input = ) now uses ‘shell-execution-environment’ redirection, which will be more natural if cmd is not a single command (but requires a POSIX-complia...

    3347 days ago

Opportunity posts

Fun

  • Bioinformatics Jokes !!

    ...the inheritance!   Why did bioinformatician always works on the command line? A: Because they don't...; fsck; fsck; umount; clean; sleep; A: Ah, Ohhh, dude, these are *NIX commands   Did they really hac...

    3222 days ago

Video

  • Bioinformatics 101 - Running BLAST

    How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at t...

    3939 days ago

  • Webinar: BLAST in the Cloud

    Presented July 30, 2014 and covering: an NCBI BLAST AMI at Amazon Web Services; introduction to AWS and setting up an instance; running command line BLAST and using the BLAST URL API via the AMI; and answers to attendee questions.

    3562 days ago

Bio-Scripts

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  • Frequent Paired-end reads (PE 2x100) mapping command lines

    bowtie2 -x hs37m -X 650 -q -1 r1.fq -2 r2.fq -S r12.bowtie2.sam bwa aln hs37m.fa r1.fq > r1.sai && bwa aln hs37m.fa r2.fq > r2.sai \ && bwa sampe hs37m r1.sai r2.sai r1.fq r2.fq > r12.bwa.sam bwa bwasw ../index/bwa/hs37m.fa r12.fq > r12.bwasw.sam ...

    Tags: Frequent, Paired-end, reads, (PE 2x100), mapping, command, lines

    2224 days ago

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