1244 days ago
Installing pb-assembly on Linux !
...a [jnarayan@hmem00 ~]$ conda config --add channels conda-forge [jnarayan@hmem00 ~]$ conda create -n denovo_asm [jnarayan@hmem00 ~]$ source activate denovo_asm (denovo_asm) [j...2062 days ago
Setting up falconUnzip conda environments for genome assembly !
...Proceed ([y]/n)? y Preparing transaction: done Verifying transaction: done Executing transaction: done # # To activate this environment, use # # $ conda activate denovo_asm # # To deactivat...2017 days ago
Bash commandline to install Anaconda !
.../conda-env no change /data/sata_data/workshop/wsu29/anaconda3/bin/activate no change /data/sata_data/workshop/wsu29/anaconda3/bin/deactivate no change /data/sata_dat...1583 days ago
Bash command to install Miniconda !
...conda-env no change /data/sata_data/workshop/wsu29/miniconda3/bin/activate no change /data/sata_data/workshop/wsu29/miniconda3/bin/deactivate no change /data/sata_dat...1583 days ago
Install snakemake and activate on conda
$ conda create -c bioconda -c conda-forge -n snakemake snakemake $ conda activate snakemake1566 days ago
Commands to install conda in Ubuntu !
.../home/jit/anaconda3/bin/conda no change /home/jit/anaconda3/bin/conda-env no change /home/jit/anaconda3/bin/activate no change /home/jit/anaconda3/bin/deactivate no change /home/jit/anac...1539 days ago
Set up WGD environment using conda !
#Wgd cannot be installed directly with bioconda at present, so it is slightly troublesome to install, because it #depends on a lot of software. wgd depends on the follow...1231 days ago
989 days ago
Installing Covid19 Environment !
...to use those, please run quast-download-gridss quast-download-silva quast-download-busco done # # To activate this environment, use # # $ conda activate covid19-genepi # # To deact...951 days ago