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Five points for bioinformatics software/tools
...ress the pros and cons of both kind of software/tools and try to assist (Hmmm not...bioinformatics. The best part about open source tools/software is that they’...are, which is entirely wrong. Using proprietary tools does not absolve you of the...3750 days ago
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DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
...have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools used for bench-marking. We f...1189 days ago
Bioinformatics approach to Boar Taint
...t file then used for calling SNPs and InDels inside previousy identified QTL regions on SSC5,13, and 7 with the aid of FreeBayes , a variant caller tool. A final list of SNPs was pre...3832 days ago
Statistics Using R with Biological Examples
...ry introductory course covers and to introduce the utilization of R as a tool for analyzing their data. My...ticians, and appreciate the great potential statistics has to offer as a tool to answer biological question...2573 days ago
Genome Assembly Tools and Software - PART2 !!
...AssemblyGeneStitch is a tool to assemble genes using netwo...t Assembly Genome Improvement ToolkitPAGIT (Post Assembly G...open-source, freely available tool that automatically downloads,...e EstimationConPADE is a tool used to estimate contig ploid...2728 days ago
Awesome perl frameworks, libraries and software - PART 2
...tbrain/irclogger - A Perl/PHP tool to log an IRC channel and mak...GTFS (transit) data perigrin/xml-toolkit - Framework for Marsh...pdf) kensanata/hex-mapping - Tools to work with hex maps for ro...bsp;- Perl application programming toolkit abh/colobus - Perl N...2537 days ago
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BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular databases (STRING, DrugBank, KEGG, PharmGKB, BioGRID, GO, HPRD, and MSig...3882 days ago
Update Genome Workbench 2.7.15 released
...lts. Genome Workbench is built on the NCBI C++ ToolKit and uses cross-platform AP...in-house at NCBI and makes use of the NCBI C++ ToolKit. The C++ ToolKit provides..., instead of plain GI numbers Mac OS: improved tooltips for toolbar buttons Phyl...3763 days ago
"Advances in Molecular Dynamics of Biomolecules" December 3-4, 2013 @ JNU
...has led to a remarkable progress in the large scale simulations at the molecular level. Molecular Dynamics (MD) simulations have been an invaluable tool in elucidating the structural...3920 days ago
Research Assistant @ NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
...31st March 2015 or earlier & Coterminus with the project Responsibilities: To help the PI for Beta testing and development of the SanGenix Tool for NGS data. Essential Qu...3849 days ago
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Bioinformatician become producer/director !!!
.... Hamari Sequence aapke pass hai. BLAST To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Search Kare Bioinformatician No.1 Mera Naam Tool Developer Hum Apke Genome Me...3961 days ago
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Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick...869/869), done. Checking connectivity... done. ➜ Tools git:(master) ✗ cd Porechop...IN_SPLIT_READ_SIZE] [-h] [--version] Porechop: a tool for finding adapters in Oxfor...2149 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...biological problem and by using bioinformatics tools this can be easily achieved....ike this package is, it provides lots of useful tools for comprehensive analysis a...nformatics company will be developing effective tools to eliminate manipulated dat...2405 days ago
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Comment on "Short-read assembly using Spades !"
...ersburg genome assembler) is a popular software tool for short-read assembly. Here...bases. This step can be performed using various tools such as Trimmomatic or FastQ...of the assembled genome. This can be done using tools such as QUAST or BUSCO. Thes...458 days ago
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